1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...cggatttcggaattgctgagagaccaggaggctgtggagtgtataccttgccgacttcgtgtgtcagttggattgactattggattttggctgctagcagTGGATGAATGTTGCTGCGAAGAGAGCTGCAGAAGTAGCTCTTCAAAAATTTAGGGTTTAGGGCTTATGCGATCAGGCTTTACGATTCAATCGTGATGCAA
species | Physcomitrella patens |
transcript | PP1S6_209V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGCGAGGAGGCCAGTTTTCCATGTTGTCATCGAACGCTTGGTTTTTAGCG TGGATGAATGTTGCTGCGAAGAGAGCTGCAGAAGTAGCTCTTCAAAAATTTEST: gi|67570412|gb|BJ943236.1|BJ943236
genomic: AGCGAGGAGGCCAGTTTTCCATGTTGTCATCGAACGCTTGGTTTTTAGCGgtaatttaca ... ctgctagcagTGGATGAATGTTGCTGCGAAGAGAGCTGCAGAAGTAGCTCTTCAAAAATTT
EST: AGCGAGGAGGCCAGTTTTCCATGTTGTCATCGAACGCTTGGTTTTTAGCG TGGATGAATGTTGCTGCGAAGAGAGCTGCAGAAGTAGCTCTTCAAAAATTT
genomic: AGCGAGGAGGCCAGTTTTCCATGTTGTCATCGAACGCTTGGTTTTTAGCGgtaatttaca ... ctgctagcagTGGATGAATGTTGCTGCGAAGAGAGCTGCAGAAGTAGCTCTTCAAAAATTT
ccttgccgacttcgtgtgtcagttggattgactattggattttggctgctagcagTGGATGAATGTTGCTGCGAAGAGAGCTGCAGAAGTAGCTCTTCAAAAATTTAGGGTTTAGGGCTTATGCGATCAGGCTTTACGATTCAATCGTGATGCAA
gattgac putative branch site (score: 1)
atttt TA-rich tract