1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaagcagcatctgttgtttgttcgtagagttcttcttgccaatctagagaccctttctttgtgatctgtttcgaaacgtcgttcactgtgaatcacatttttttgtatggagaaatcgatattcagtgcttacatggatgctttctgagcattggtaccacggtgtgcacagGTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATATAACGTTTCCATCTTCTATACTGCCCCAACTGCAATTCGTTCATTGATGC
species | Physcomitrella patens |
transcript | PP1S398_15V6.2 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGG GTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATATEST: gi|162163342|gb|FC339668.1|FC339668
genomic: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGGgtaagcagca ... gtgtgcacagGTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATAT
EST: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGG GTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATATEST: gi|162197340|gb|FC372302.1|FC372302
genomic: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGGgtaagcagca ... gtgtgcacagGTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATAT
EST: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGG GTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATATEST: gi|162208860|gb|FC384996.1|FC384996
genomic: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGGgtaagcagca ... gtgtgcacagGTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATAT
EST: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGG GTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATATEST: gi|162255648|gb|FC431646.1|FC431646
genomic: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGGgtaagcagca ... gtgtgcacagGTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATAT
EST: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGG GTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATATEST: gi|162257811|gb|FC434009.1|FC434009
genomic: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGGgtaagcagca ... gtgtgcacagGTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATAT
EST: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGG GTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATATEST: gi|162178871|gb|FC354803.1|FC354803
genomic: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGGgtaagcagca ... gtgtgcacagGTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATAT
EST: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGG GTCCCNCA-CTATCCAGATGCANGTCGCTGCTGGGACATAGTAGACAAATA
genomic: TGACATATGGCCCTCTTCTCAACGGTGCTAGCATGGTTGTCTTTGAAGGGgtaagcagca ... gtgtgcacagGTCCC-CAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATA
gatattcagtgcttacatggatgctttctgagcattggtaccacggtgtgcacagGTCCCCAACTATCCAGATGCAGGTCGCTGCTGGGACATAGTAGACAAATATAACGTTTCCATCTTCTATACTGCCCCAACTGCAATTCGTTCATTGATGC
tgcttac putative branch site (score: 5)