1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaacccccccaccttctccctctgtctccttgttcactggctcactgcgaaatttgggctagagtttacagtgacgcgggtttctctttgatgccgcagGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAG
species | Oryza sativa |
transcript | LOC_Os04g33060.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAG GCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCEST: gi|29687806|gb|CB684081.1|CB684081
genomic: GCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGgtaacccccc ... gatgccgcagGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTC
EST: GCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAG GCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCEST: gi|88694533|gb|CI738571.1|CI738571
genomic: GCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGgtaacccccc ... gatgccgcagGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTC
EST: GCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAG GCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTC
genomic: GCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGgtaacccccc ... gatgccgcagGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTC
ctgcgaaatttgggctagagtttacagtgacgcgggtttctctttgatgccgcagGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAG
ctttgat putative branch site (score: 8)
tttctctttg CT-rich tract
aaattt TA-rich tract