1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagctacttaaattggtttttattctctgcttcctctttacacatttactgtatgttcaattcaattaggaaagaactgaaacagaagtgaaattagttttgatatatgaggataattagtggttagttttatgctctgaaattctactgatgcatgtttgtgttcccaactagGCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTGCTCATCCCACCATTCATAATATGGAAATACATGTACGGCTAGACATGTC
species | Oryza sativa |
transcript | LOC_Os01g67250.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CGAGAAAGGTTCCTTAGAAGATGATATATTCCATGAGCCCATCTTTTCCT GCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTGEST: gi|58656617|gb|CK045297.1|CK045297
genomic: CGAGAAAGGTTCCTTAGAAGATGATATATTCCATGAGCCCATCTTTTCCTgtaagctact ... tcccaactagGCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTG
EST: CGAGAAAGGTTCCTTAGAAGATGATATATTCCATGAGCCCATCTTTTCCT GCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTGEST: gi|58590475|gb|CF988783.1|CF988783
genomic: CGAGAAAGGTTCCTTAGAAGATGATATATTCCATGAGCCCATCTTTTCCTgtaagctact ... tcccaactagGCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTG
EST: CGAGAAAGGTTCCTTAGAAGATGATATATTCCATGAGCCCATCTTTTCCT GCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTGEST: gi|29625771|gb|CB630782.1|CB630782
genomic: CGAGAAAGGTTCCTTAGAAGATGATATATTCCATGAGCCCATCTTTTCCTgtaagctact ... tcccaactagGCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTG
EST: CGAGAAAGGTTCCTTAGAAGATGATATATTCCATGAGCCCATCTTTTCCT GCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTG
genomic: CGAGAAAGGTTCCTTAGAAGATGATATATTCCATGAGCCCATCTTTTCCTgtaagctact ... tcccaactagGCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTG
gtggttagttttatgctctgaaattctactgatgcatgtttgtgttcccaactagGCATGTGCAAGGAGCTAAACGATTTGCAATATCGGACCTATGAGATTGTTGCTCATCCCACCATTCATAATATGGAAATACATGTACGGCTAGACATGTC
tactgat putative branch site (score: 23)
tgttccc putative PPT
tagttttat TA-rich tract