1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaacatatgtcactgtttatccgcattgaataataggttatgctgatatatacattttctccttttgccacatgttagctgaattaaatctgtttagGTTTCTCTGGGGTACTTCATCGCTGACCTTGCTATGTTATCCTGGGCTTATCCTTCCCTTGGCGGAATGGAGTAT
species | Oryza sativa |
transcript | LOC_Os01g56230.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATGGCCCAGTAACAGTTCGGAGTTCAAACCTCTCCAATTTTACACTGGGG GTTTCTCTGGGGTACTTCATCGCTGACCTTGCTATGTTATCCTGGGCTTATEST: gi|300215972|gb|HO088598.1|HO088598
genomic: ATGGCCCAGTAACAGTTCGGAGTTCAAACCTCTCCAATTTTACACTGGGGgtaacatatg ... atctgtttagGTTTCTCTGGGGTACTTCATCGCTGACCTTGCTATGTTATCCTGGGCTTAT
EST: ATGGCCCAGTAACAGTTCGGAGTTCAAACCTCTCCAATTTTACACTGGGG GTTTCTCTGGGGTACTTCATCGCTGACCTTGCTATGTTATCCTGGGCTTATEST: gi|29660432|gb|CB656707.1|CB656707
genomic: ATGGCCCAGTAACAGTTCGGAGTTCAAACCTCTCCAATTTTACACTGGGGgtaacatatg ... atctgtttagGTTTCTCTGGGGTACTTCATCGCTGACCTTGCTATGTTATCCTGGGCTTAT
EST: ATGGCCCAGTAACAGTTCGGAGTTCAAACCTCTCCAATTTTACACTGGGG GTTTCTCTGGGGTACTTCATCGCTGACCTTGCTATGTTATCCTGGGCTTAT
genomic: ATGGCCCAGTAACAGTTCGGAGTTCAAACCTCTCCAATTTTACACTGGGGgtaacatatg ... atctgtttagGTTTCTCTGGGGTACTTCATCGCTGACCTTGCTATGTTATCCTGGGCTTAT
ctgatatatacattttctccttttgccacatgttagctgaattaaatctgtttagGTTTCTCTGGGGTACTTCATCGCTGACCTTGCTATGTTATCCTGGGCTTATCCTTCCCTTGGCGGAATGGAGTAT
tgctgat putative branch site (score: 3)
tctgttt putative PPT
aattaaatctgttta TA-rich tract