1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaagctacaatatagactgaaatttccctttgttataaacttcctttaccttatattatccacactaactattgaatcatttgtttggctctttgaaacctttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCATTGCAGCAGCAATTGCTTTTGTACTCCCGGATATAAGTCATTGTCTTTG
species | Oryza sativa |
transcript | LOC_Os01g29390.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|38478879|gb|CF963012.1|CF963012
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGCCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|89190931|gb|CI392784.1|CI392784
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|88275732|gb|CI396336.1|CI396336
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|86868722|gb|CI333099.1|CI333099
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|88970727|gb|CI385387.1|CI385387
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: AGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|313079212|gb|HO663793.1|HO663793
genomic: AGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: TCAACAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGT--GGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|157650503|gb|EX450137.1|EX450137
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACEST: gi|86844233|gb|CI337612.1|CI337612
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCAC
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|88559283|gb|CI489848.1|CI489848
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCAEST: gi|88547021|gb|CI477289.1|CI477289
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
EST: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAG CAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
genomic: TCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGgtaagctaca ... tttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCA
ttatccacactaactattgaatcatttgtttggctctttgaaacctttctaatagCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGATCAAGACGCAGCCATTGCAGCAGCAATTGCTTTTGTACTCCCGGATATAAGTCATTGTCTTTG
cactaac putative branch site (score: 1)
cctttct putative PPT
tttctaata TA-rich tract