1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATGCACTTTCACTCCAAACAACTCAATCTGCTAGGGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTGgtaaattaacaatctcctcagaaatttcatcacacactatcacgtttttgtttgttgttcctttctcaaccactgaaaccaagtaataatggcgtgtata...
species | Glycine max |
transcript | GLYMA20G36590.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCAATCTGCTAGGGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTG TTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTAEST: gi|193392791|gb|FK360938.1|FK360938
genomic: CTCAATCTGCTAGGGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTGgtaaattaac ... cttgttttagTTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTA
EST: CTCAATCTGCTAGGGGTGCTTTGCTTGTGATCTTGTTGGAGGTTCTTCTG TTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTAEST: gi|213589740|gb|DB973271.1|DB973271
genomic: CTCAATCTGCTAGGGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTGgtaaattaac ... cttgttttagTTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTA
EST: CTCAATCTGCTAGGGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTG TTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTAEST: gi|19054105|gb|BM732772.1|BM732772
genomic: CTCAATCTGCTAGGGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTGgtaaattaac ... cttgttttagTTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTA
EST: GGAGGTTCTTCTG TTCAAGAGAACATGGTAACTATAATTGTGGATCTTCGGTCAGACACAGTTAEST: gi|208170956|gb|GD972389.1|GD972389
genomic: GGAGGTTCTTCTGgtaaattaac ... cttgttttagTTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTA
EST: CTCAATCTGCTA-GGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTG TTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTA
genomic: CTCAATCTGCTAGGGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTGgtaaattaac ... cttgttttagTTCAAGAGAACATGGTAACTAGAATTGTGGATCTTCGGTCAGACACAGTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCACTTTCACTCCAAACAACTCAATCTGCTAGGGGTGCTTTGCTTGCGATCTTGTTGGAGGTTCTTCTGgtaaattaacaatctcctcagaaatttcatcacacactatcacgtttttgtttgttgttcctttctcaaccactgaaaccaagtaataatggcgtgtata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG