1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CTGAAAAGGTTACTGAAGTTGGATGGTACGTTCTTGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCCgtgagttgagttatttgaaactgtctctctctctgttttttttttttgaatgaacaaagtggagtggagctagggctaggtattgtacattttgattttt...
species | Glycine max |
transcript | GLYMA20G36110.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCC AGCATTTCTTGAATGGATACCTCTCCGAAAATACGTTTGTGTGGTCTGAAGEST: gi|213601316|gb|DB968674.1|DB968674
genomic: TGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCCgtgagttgag ... gtgtggatagAGCATTTCTTGAATGGATACCTCTCCGAAAATACGTTTGTGTGGTCTGAAG
EST: TGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCC AGCATTTCTTGAATGGATACCTCTCCGAAAATACGTTTGTGTGGTCTGAAGEST: gi|18710818|gb|BM522543.1|BM522543
genomic: TGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCCgtgagttgag ... gtgtggatagAGCATTTCTTGAATGGATACCTCTCCGAAAATACGTTTGTGTGGTCTGAAG
EST: TGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCC AGCATTTCTTGAATGGATACCTCTCCGAAAATACGTTTGTGTGGTCTGAAGEST: gi|6482635|gb|AW201880.1|AW201880
genomic: TGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCCgtgagttgag ... gtgtggatagAGCATTTCTTGAATGGATACCTCTCCGAAAATACGTTTGTGTGGTCTGAAG
EST: TACGCCTTCTCTGAGTTGTGCC AGCATTTCTTGAATGGATACCTCTCCGAAAATACGTTTGTGTGGTCTGAAG
genomic: TACGCCTTCTCTGAGTTGTGCCgtgagttgag ... gtgtggatagAGCATTTCTTGAATGGATACCTCTCCGAAAATACGTTTGTGTGGTCTGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGAAAAGGTTACTGAAGTTGGATGGTACGTTCTTGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCCgtgagttgagttatttgaaactgtctctctctctgttttttttttttgaatgaacaaagtggagtggagctagggctaggtattgtacattttgattttt
- - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggagtgg