1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GAAAACCAGCACTCAGTGTAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAGgtagctgaatttgttgttcaaatccacttttcttttagtcaacaattctgtaaacgtgggatcctatgatatgtgatagggtaaaaggacataattaaac...
species | Glycine max |
transcript | GLYMA20G31860.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAG GTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTCEST: gi|21601120|gb|BQ611451.1|BQ611451
genomic: TAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAGgtagctgaat ... tgtttgtcagGTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTC
EST: CTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAG GTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTCEST: gi|193422441|gb|FK387562.1|FK387562
genomic: CTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAGgtagctgaat ... tgtttgtcagGTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTC
EST: TAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAG GTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTCEST: gi|254328533|gb|GR832905.1|GR832905
genomic: TAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAGgtagctgaat ... tgtttgtcagGTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTC
EST: TAGTGGACATTCTAGAGACAAACATACAAGAAAACAGCACGTTGGTCCAG GTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTCEST: gi|254328534|gb|GR832906.1|GR832906
genomic: TAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAGgtagctgaat ... tgtttgtcagGTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTC
EST: TAGTGGACATTCTAGAGACAAACATACAAGAAAACAGCACGTTGGTCCAG GTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTC
genomic: TAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAGgtagctgaat ... tgtttgtcagGTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAACCAGCACTCAGTGTAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAGgtagctgaatttgttgttcaaatccacttttcttttagtcaacaattctgtaaacgtgggatcctatgatatgtgatagggtaaaaggacataattaaac
- - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - AAGAAA