1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCAAACCCTCCTGATCCCAGGGCATTTCCATTTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcactagacaaatattattactcctcaaagtttccttattttatctgtgtaaatgtgaaacgtctacttatcttaaatgcag
species | Glycine max |
transcript | GLYMA20G31150.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTG GTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCCEST: gi|192321753|gb|FK013621.1|FK013621
genomic: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcacta ... ttaaatgcagGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCC
EST: TTATTTTACTTGGAAACAAGGTCGATATTGATGGTGGGAATAGTCGAGTG GTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCCEST: gi|298186082|gb|HO036715.1|HO036715
genomic: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcacta ... ttaaatgcagGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCC
EST: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTG GTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCCEST: gi|151399673|gb|EV269544.1|EV269544
genomic: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcacta ... ttaaatgcagGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCC
EST: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTG GTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCCEST: gi|8827737|gb|BE211467.1|BE211467
genomic: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcacta ... ttaaatgcagGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCC
EST: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTG GTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCCEST: gi|151393176|gb|EV263051.1|EV263051
genomic: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcacta ... ttaaatgcagGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCC
EST: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTG GTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCCEST: gi|192321754|gb|FK013622.1|FK013622
genomic: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcacta ... ttaaatgcagGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGCAAAAGGGAATATTCCC
EST: TTATTTTACTTGGAAACAAGGTCGATATTGATGGTGGGAATAGTCGAGTG GTTTCTGAGAAGAAAGCAAAG-ACTGGTGTGCCGC
genomic: TTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcacta ... ttaaatgcagGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAAACCCTCCTGATCCCAGGGCATTTCCATTTATTTTACTTGGAAACAAGATCGATATTGATGGTGGGAATAGTCGAGTGgtaggcactagacaaatattattactcctcaaagtttccttattttatctgtgtaaatgtgaaacgtctacttatcttaaatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG