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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCAAACCAAACCATCGAGTGCGTTGCGCCCCCACCGTAAGTAGAGCTATGTCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGGgtacgtacgttctttctagtttccctgcaataccgtttttcgaaactcgaaatctgattcattcattcccattgccattgccattgccattgccag

Basic information

species Glycine max
transcript GLYMA20G31150.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298193144|gb|HO033578.1|HO033578
EST:     TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGG                         GGTTGGGAAGACCTCGTTGATGAATCA
genomic: TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGGgtacgtacgt ... ccattgccagGGTTGGGAAGACCTCGTTGATGAATCA
EST: gi|298186082|gb|HO036715.1|HO036715
EST:     TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGG                         GGTTGGGAAGACCTCGTTGATGAATCA
genomic: TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGGgtacgtacgt ... ccattgccagGGTTGGGAAGACCTCGTTGATGAATCA
EST: gi|8827737|gb|BE211467.1|BE211467
EST:     TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGG                         GGTTGGGAAGACCTCGTTGATGAATCA
genomic: TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGGgtacgtacgt ... ccattgccagGGTTGGGAAGACCTCGTTGATGAATCA
EST: gi|298167138|gb|HO010577.1|HO010577
EST:     TCGTTGCGCAGGCGAACCTTGCTCAGGGTCATCGTTCTCGGCGACAGCGG                         GGTTGGGAAGACCTCGTTGATGAATCA
genomic: TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGGgtacgtacgt ... ccattgccagGGTTGGGAAGACCTCGTTGATGAATCA
EST: gi|151393176|gb|EV263051.1|EV263051
EST:     TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGG                         GGTTGGGAAGACCTCGTTGATGAATCA
genomic: TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGGgtacgtacgt ... ccattgccagGGTTGGGAAGACCTCGTTGATGAATCA
EST: gi|254337577|gb|GR849423.1|GR849423
EST:     TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGG                         GGTTGGGAAGACCTCGTTGATGAATCA
genomic: TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGGgtacgtacgt ... ccattgccagGGTTGGGAAGACCTCGTTGATGAATCA
EST: gi|192321754|gb|FK013622.1|FK013622
EST:     TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGG                         GGTTGGGAAGACCTCGTTGATGAATCA
genomic: TCGTTGCGCAGGCGAACCTTGCTCAAGGTCATTGTTCTCGGCGACAGCGGgtacgtacgt ... ccattgccagGGTTGGGAAGACCTCGTTGATGAATCA