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gtatgccattttcaatctctctcatatttaaggttactgaatgaagtgtgaagacataatttatggattaactttgattggtgcagTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGGACAGGCTTTCACCGGCAACCAAAGG
species | Glycine max |
transcript | GLYMA20G30620.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: GGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCG TGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGGEST: gi|120531949|gb|EH260082.1|EH260082
genomic: GGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCGgtatgccatt ... attggtgcagTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGG
EST: GGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCG TGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGGEST: gi|31475753|gb|CD417781.1|CD417781
genomic: GGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCGgtatgccatt ... attggtgcagTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGG
EST: GGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCG TGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGGEST: gi|192316334|gb|FK011679.1|FK011679
genomic: GGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCGgtatgccatt ... attggtgcagTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGG
EST: GGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCG TGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGG
genomic: GGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCGgtatgccatt ... attggtgcagTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGG
ggttactgaatgaagtgtgaagacataatttatggattaactttgattggtgcagTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGGACAGGCTTTCACCGGCAACCAAAGG
ataatttatggattaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgccattttcaatctctctcatatttaaggttactgaatgaagtgtgaagacataatttatggattaactttgattggtgcagTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGGACAGGCTTTCACCGGCAACCAAAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA