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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCCGTCACCAGCATGTTCGTTGGACACCTCGGCGACATTCAGCTCTCTGCTATCTCTCTCATTAACTCCGTCATTGGCACTTTTGCCTTTGGTTTCATGgttagtgcctttgtattgttttttagatgttgttctgattagaatttaagttttattttgataattacataataagtgtttacattaaaggccagcttag...

Basic information

species Glycine max
transcript GLYMA20G30140.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209700016|gb|BW652928.1|BW652928
EST:     CTATCTCTCTCATTAACTCCGTCATTGGCACTTTTGCCTTTGGTTTCATG                         CTTGGGATGGGGAGTGCAACTGAGACACTCTGTGGACAAGCTTTCGGAGCT
genomic: CTATCTCTCTCATTAACTCCGTCATTGGCACTTTTGCCTTTGGTTTCATGgttagtgcct ... aaacctgtagCTTGGGATGGGGAGTGCAACTGAGACACTCTGTGGACAAGCTTTCGGAGCT
EST: gi|209700812|gb|BW683068.1|BW683068
EST:     CTATCTCTCTCATTAACTCCGTCATTGGCACTTTTGCCTTTGGTTTCATG                         CTTGGGATGGGGAGTGCAACTGAGACACTCTGTGGACAAGCTTTCGGAGCT
genomic: CTATCTCTCTCATTAACTCCGTCATTGGCACTTTTGCCTTTGGTTTCATGgttagtgcct ... aaacctgtagCTTGGGATGGGGAGTGCAACTGAGACACTCTGTGGACAAGCTTTCGGAGCT