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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGAGAAAGTGAGGCTAATGTGAGGGAAATTTTTGACAAGGCTCGCGGTTCTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAGgtttgtaccactcaatgataccaagctaggacttggggaaaaattcattggtttcaaaattttatgtctagacaactattattggctttttttggttatcagtcttcaactattttgccttggtttgtcttgcag

Basic information

species Glycine max
transcript GLYMA19G36740.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207747409|gb|GD719862.1|GD719862
EST:     CTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAG                         AGGGGTAGTAGTGTCGGAGATGCTGGTGG
genomic: CTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAGgtttgtacca ... tgtcttgcagAGGGGTAGTAGTGTCGGAGATGCTGGTGG
EST: gi|193365343|gb|FK329750.1|FK329750
EST:     CTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAG                         AGGGGTAGTAGTGTCGGAGATGCTGGTGGTGCTGCTGACAGGGTTTTGAAC
genomic: CTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAGgtttgtacca ... tgtcttgcagAGGGGTAGTAGTGTCGGAGATGCTGGTGGTGCTGCTGACAGGGTTTTGAAC
EST: gi|208092403|gb|GD888390.1|GD888390
EST:     CTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAG                         AGGGGTAGTAGTGTCGGAGATGCTGGTGGTGCTGCTGACAGGGTTTTGAAC
genomic: CTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAGgtttgtacca ... tgtcttgcagAGGGGTAGTAGTGTCGGAGATGCTGGTGGTGCTGCTGACAGGGTTTTGAAC
EST: gi|208264479|gb|GE064935.1|GE064935
EST:     CTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAG                         AGGGGTAGTAGTGTCGG
genomic: CTGCTCCATGTGTCCTATTCTTTGATGAACTTGACTCTATTGCAACTCAGgtttgtacca ... tgtcttgcagAGGGGTAGTAGTGTCGG