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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCTTTTTGACTTATTCCATCATGATGTTCGGCTGTGGAAAGCATACAGCACCACCCTGGAGgtatatctatttttgttttcctgatgtaggttatattgtcttggcgtcattgtatacttgaatgaacaaaatatgatgttcctgtctgttttctatgaacaacag

Basic information

species Glycine max
transcript GLYMA18G47050.1
intron # 22
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12772054|gb|BG236981.1|BG236981
EST:     TATTCCGTCATGATGTTCGTCTGTGGAAAGCATACAGCACCACCCTGGAG                         TCACACCCAGCATTTACAGAATAT
genomic: TATTCCATCATGATGTTCGGCTGTGGAAAGCATACAGCACCACCCTGGAGgtatatctat ... tgaacaacagTCACACCCAGCATTTACAGAATAT
EST: gi|11688934|gb|BF596672.1|BF596672
EST:     TATTCCATCATGATGTTCGGCTGTGGAAAGCATACAGCACCACCCTGGAG                         TCACACCCAGCAT
genomic: TATTCCATCATGATGTTCGGCTGTGGAAAGCATACAGCACCACCCTGGAGgtatatctat ... tgaacaacagTCACACCCAGCAT
EST: gi|22522775|gb|BU081586.1|BU081586
EST:     TATTCCGTCATGATGTTCGTCTGTGGAAAGCATACAGCACCACCCTGGAG                         TCACACCCAGCATTTACAGAATATCAAGATTTGCTGGAAGACCTGGAAGAG
genomic: TATTCCATCATGATGTTCGGCTGTGGAAAGCATACAGCACCACCCTGGAGgtatatctat ... tgaacaacagTCACACCCAGCATTTACAGAATATCAAGATTTGCTGGAAGACCTGGAAGAG