1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TACCATTTATGCAGATCTTTGTTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAATCCCAGTCGATAGAATTTTTTTCTCCCAGAAGTTGGCACATCACTggtatggaacctgacacctgactgttcatgctttcattgttgaactgcggtatgtttctgtgttttgtgtttacagcaccataacttaacaaatcaccaatctgcaattacctggttgtgacaataaca
species | Glycine max |
transcript | GLYMA17G35330.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCCCAGAAGTTGGCACATCACT GGTTTGTTGTTTGAAGCTCAATCTTTGCATAAGGAGGCCTTTGTTTCCTTCEST: gi|21257256|gb|BQ454144.1|BQ454144
genomic: TCCCAGAAGTTGGCACATCACTggtatggaac ... gacaataacaGGTTTGTTGTTTGAAGCTCAATCTTTGCATAAGGAGGCCTTTGTTTCCTTC
EST: CTCCCAGAAGTTGGCACATCACT GGTTTGTTGTTTGAAGCTCAATCTTTGCATAAGGAGGCCTTTGTTTCCTTCEST: gi|57574763|gb|CX547738.1|CX547738
genomic: CTCCCAGAAGTTGGCACATCACTggtatggaac ... gacaataacaGGTTTGTTGTTTGAAGCTCAATCTTTGCATAAGGAGGCCTTTGTTTCCTTC
EST: CCAGAAGTTGGCACATCACT GGTTTGTTGTTTGAAGCTCAATCTTTGCATAAGGAGGCCTTTGTTTCCTTC
genomic: CCAGAAGTTGGCACATCACTggtatggaac ... gacaataacaGGTTTGTTGTTTGAAGCTCAATCTTTGCATAAGGAGGCCTTTGTTTCCTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACCATTTATGCAGATCTTTGTTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAATCCCAGTCGATAGAATTTTTTTCTCCCAGAAGTTGGCACATCACTggtatggaacctgacacctgactgttcatgctttcattgttgaactgcggtatgtttctgtgttttgtgtttacagcaccataacttaacaaatcaccaatctgcaattacctggttgtgacaataaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT