1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GCAGCAACCCAAGCAAGCAATTGAGACCTACAGAATCTTGCTAGCTGTAATTGAAGCAAGAAAAGAGCATTGGCTTCAAGCTAAGACATTCAGGCACGAGgtttgtattattgtttaagggaacacaactataacatccattgtattagtatagacttgtattaaaattgactaaagaagcaaatcaagcattgctctta...
species | Glycine max |
transcript | GLYMA17G35330.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGAAGCAAGAAAAGAGCATTGGCTTCAAGCTAAGACATTCAGGCACGAG GCATTAACAGAACAGAAGTTGGAAGTGGAAGCCTGGCAGGATTTGGCTACCEST: gi|193428919|gb|FK397591.1|FK397591
genomic: TTGAAGCAAGAAAAGAGCATTGGCTTCAAGCTAAGACATTCAGGCACGAGgtttgtatta ... ttgtttgcagGCATTAACAGAACAGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACC
EST: TTGAAGCAAGAAAAGAGCATTGGCTTCAAGCTAAGACATTCAGGCACGAG GCATTAACAGAACAGAAGTTGGAAGTGGAAGCCTGGCAGGATTTGGCTACC
genomic: TTGAAGCAAGAAAAGAGCATTGGCTTCAAGCTAAGACATTCAGGCACGAGgtttgtatta ... ttgtttgcagGCATTAACAGAACAGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAGCAACCCAAGCAAGCAATTGAGACCTACAGAATCTTGCTAGCTGTAATTGAAGCAAGAAAAGAGCATTGGCTTCAAGCTAAGACATTCAGGCACGAGgtttgtattattgtttaagggaacacaactataacatccattgtattagtatagacttgtattaaaattgactaaagaagcaaatcaagcattgctctta
- - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT