1 5' 3' | 2 5' 3' | 3 5' 3' |
GAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTCTGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCAgtgagttatctcattccattcccttttttgcagtttggtttgtgatcaatgctgtcatcaagtttgtaaattgtgctttttggctgtttatttatag
species | Glycine max |
transcript | GLYMA17G34960.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGACA ACAAAGGGAGCCAGTTCTGCGGCCTCTACEST: gi|213596299|gb|DB960228.1|DB960228
genomic: GAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTG-CAgtgagttatc ... ttatttatagACAAAGGGAGCCAGTTCTGCGGCCTCTAC
EST: TGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCA ACAAAGGGAGCCAGTTCTGCGGCTTCTACATCAAAATCTGGATCTGGEST: gi|24135934|gb|BU926444.1|BU926444
genomic: TGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCAgtgagttatc ... ttatttatagACAAAGGGAGCCAGTTCTGCGGCCTCTACATCAAAATCTGGATCTGG
EST: TGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCA ACAAAGGGAGCCAGTTCTGCGGCCTCTACATCAAAATCTGGATCTGGEST: gi|151400464|gb|EV270278.1|EV270278
genomic: TGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCAgtgagttatc ... ttatttatagACAAAGGGAGCCAGTTCTGCGGCCTCTACATCAAAATCTGGATCTGG
EST: TGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCA ACAAAGGGAGCCAGTTCTGCGGCCTCTACATCAAAATCTGGEST: gi|24135854|gb|BU926364.1|BU926364
genomic: TGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCAgtgagttatc ... ttatttatagACAAAGGGAGCCAGTTCTGCGGCCTCTACATCAAAATCTGG
EST: TGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCA ACAAAGGGAGCCAGTTCTGCGGCCTCTACATCAAAATCTGGATCTGG
genomic: TGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCAgtgagttatc ... ttatttatagACAAAGGGAGCCAGTTCTGCGGCCTCTACATCAAAATCTGGATCTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTCTGAAGACTGGAGCTCGTAAGCATGAATTGTTGGTTACTAATGCAGTTGCAgtgagttatctcattccattcccttttttgcagtttggtttgtgatcaatgctgtcatcaagtttgtaaattgtgctttttggctgtttatttatag
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT