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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TACGATCCAATGGCTGCGACCCTTTTCCAGGGATTGGGAGTTGTGACCCCATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAGgttcgcttcttaaatttctttccttttttttcttcaaaattttcgaactgcttattgagaatttttgttttggatacgtagttcctatggctagttttct...

Basic information

species Glycine max
transcript GLYMA17G34960.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208291089|gb|GE081557.1|GE081557
EST:     ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAG                         AGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
genomic: ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAGgttcgcttct ... attggttcagAGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
EST: gi|213596299|gb|DB960228.1|DB960228
EST:     ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAG                         AGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
genomic: ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAGgttcgcttct ... attggttcagAGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
EST: gi|24135934|gb|BU926444.1|BU926444
EST:     ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAG                         AGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
genomic: ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAGgttcgcttct ... attggttcagAGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
EST: gi|151400464|gb|EV270278.1|EV270278
EST:     ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAG                         AGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
genomic: ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAGgttcgcttct ... attggttcagAGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
EST: gi|24135854|gb|BU926364.1|BU926364
EST:     ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAG                         AGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC
genomic: ATCATTCTCTTCTTCCCACTCCAACAAGTTCATGCTTTCTTCCCTCTCAGgttcgcttct ... attggttcagAGAGGAAAGATGGCATATTTGTGGTCAGATCTGATGCTGATGCAAGGATTC