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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGATGGAGGCTGAGAAACAGCACCAGTTTGATGTGGACCTCGGCAACCTCATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAGgtaactttttcttcttgttgttttcttttttgacactgccgttacttacgttaattgaacacag

Basic information

species Glycine max
transcript GLYMA17G12440.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8826182|gb|BE209842.1|BE209842
EST:     ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAG                         GGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
genomic: ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAGgtaacttttt ... ttgaacacagGGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
EST: gi|12772216|gb|BG237143.1|BG237143
EST:     ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAG                         GGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
genomic: ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAGgtaacttttt ... ttgaacacagGGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
EST: gi|209697625|gb|BW663880.1|BW663880
EST:     ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAG                         GGAGGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
genomic: ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAGgtaacttttt ... ttgaacacagGGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
EST: gi|15287451|gb|BI471342.1|BI471342
EST:     ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAG                         GGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
genomic: ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAGgtaacttttt ... ttgaacacagGGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
EST: gi|192299497|gb|FG992555.1|FG992555
EST:     ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAG                         GGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC
genomic: ATGGCTTTCGATTCCTATCACACCTTCCCTTCCCAACCACCTCTTTCCAGgtaacttttt ... ttgaacacagGGAAGACCTCACCAGGCAGTGTTTACTGAAAGGCACTCACTTGGTTCAAGC