1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
ATCGGACACATCTGTGGTTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTgtaagtttatcttgtgttaagatagaatataatctgtgtaattatgtaatttactcaccaaaagttttgtgtacag
species | Glycine max |
transcript | GLYMA16G21840.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACT AAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAGEST: gi|10256222|gb|BE823988.1|BE823988
genomic: TTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTgtaagtttat ... ttgtgtacagAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAG
EST: TTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACT AAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAGEST: gi|120496849|gb|EH225016.1|EH225016
genomic: TTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTgtaagtttat ... ttgtgtacagAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAG
EST: TTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACT AAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAGEST: gi|12688892|gb|BG155228.1|BG155228
genomic: TTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTgtaagtttat ... ttgtgtacagAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAG
EST: TTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACT AAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAG
genomic: TTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTgtaagtttat ... ttgtgtacagAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGCGAAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCGGACACATCTGTGGTTGACATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTgtaagtttatcttgtgttaagatagaatataatctgtgtaattatgtaatttactcaccaaaagttttgtgtacag
- - - - - - - - - - - - - - - - - GCTGAT