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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTTACTTAAACGCAAGAAATCATCGGACACCGTTAATGTTGTCAAAGTGGCACACAGTCAACCATCTAGACCACAGTTAAGACACATgtatttctcttttcatcatgagtgctgcgtgttgtacttaatttctttatctattgtatagttgacaacccatgaagtgtgttattaatttatacccatgatggaagtgtttactttggccttttggttcgtttgctgacttacctgtctctgttggtatgtctggttgggctag

Basic information

species Glycine max
transcript GLYMA16G21840.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120496849|gb|EH225016.1|EH225016
EST:     AGTTAAGACACAT                         ATCGGACACATCTGTGGTTGACATTGGACCTCCTGCTGATTGGGTAAAAAT
genomic: AGTTAAGACACATgtatttctct ... gttgggctagATCGGACACATCTGTGGTTGACATTGGACCTCCTGCTGATTGGGTAAAAAT
EST: gi|12688892|gb|BG155228.1|BG155228
EST:     GTTGTCAAAGTGGCACACAGTCAACCATCTAGACCACAGTTAAGACACAT                         ATCGGACACATCTGTGGTTGACATTGGACCTCCTGCTGATTGGGTAAAAAT
genomic: GTTGTCAAAGTGGCACACAGTCAACCATCTAGACCACAGTTAAGACACATgtatttctct ... gttgggctagATCGGACACATCTGTGGTTGACATTGGACCTCCTGCTGATTGGGTAAAAAT