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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTGTTGAAGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGAAGGCAAGGTTCTAGGGTCGCTTCGTGCAGGAGTACACTGGACGCCCGCTgtaagtggatccttccctaactaactaggagtctaggatctcagttcacatcaataatcctctgacggtctgatcattagagcctatgggtagaagtagtcaactgctgcggcatatcccttggggcattgaactaagatcctatatctttagaaagtatttgttatgacttccatttcttatgtcactcaacag

Basic information

species Glycine max
transcript GLYMA12G07980.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254332416|gb|GR843893.1|GR843893
EST:     AAGGCAAGGTTCTAGGGTCGCTTCGTGCAGGAGTACACTGGACGCCCGCT                         GTATTTGCTGTTGCTCAAAGGGAGTTTGTGGACTCATTCTTTTCTCAG
genomic: AAGGCAAGGTTCTAGGGTCGCTTCGTGCAGGAGTACACTGGACGCCCGCTgtaagtggat ... cactcaacagGTATTTGCTGTTGCTCAAAGGGAGTTTGTGGACTCATTCTTTTCTCAG
EST: gi|254332415|gb|GR843892.1|GR843892
EST:     AAGGCAAGGTTCTAGGGTCGCTTCGTGCAGGAGTACACTGGACGCCCGCT                         GTATTTGCTGTTGCTCAAAGGGAGTTTGTGGACTCATTCTTTTTCTCAG
genomic: AAGGCAAGGTTCTAGGGTCGCTTCGTGCAGGAGTACACTGGACGCCCGCTgtaagtggat ... cactcaacagGTATTTGCTGTTGCTCAAAGGGAGTTTGTGGACTCATTCTTTT-CTCAG