Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   		5  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttctatatcaactttttcttaacaggcgaatgcttcctaattattaaaatgaagttgatgattaattaattttgtgattgcag

Basic information

species Glycine max
transcript GLYMA08G19580.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298187563|gb|HO034712.1|HO034712
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298170305|gb|HO018929.1|HO018929
EST:     GTAACATCATTTCTGTGATGGCGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|192294396|gb|FG987325.1|FG987325
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298187340|gb|HO034489.1|HO034489
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTCTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|7589003|gb|AW704786.1|AW704786
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298194228|gb|HO040876.1|HO040876
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298179714|gb|HO024929.1|HO024929
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAGAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298175454|gb|HO015087.1|HO015087
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298189496|gb|HO037899.1|HO037899
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|9987045|gb|BE661153.1|BE661153
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298178182|gb|HO023917.1|HO023917
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|5342404|gb|AI794688.1|AI794688
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|7589271|gb|AW705048.1|AW705048
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298170026|gb|HO018650.1|HO018650
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGCTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|6455201|gb|AW185884.1|AW185884
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298163327|gb|HO012060.1|HO012060
EST:     GTAACATCATTTCTGTGACGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298190324|gb|HO032445.1|HO032445
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACACAAAGAAATGCGCGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|6665883|gb|AW277342.1|AW277342
EST:     AGGTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: AGGTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298188152|gb|HO034845.1|HO034845
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298182014|gb|HO026189.1|HO026189
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298199112|gb|HO042475.1|HO042475
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGTTATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|6455326|gb|AW186009.1|AW186009
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|298185761|gb|HO028072.1|HO028072
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATTCAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
EST: gi|7589881|gb|AW705646.1|AW705646
EST:     GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGT                         GCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC
genomic: GTAACATCATTTCTGTGATGGTGTACTTGGCTCCGGTgtaagttcta ... gtgattgcagGCCAACGTTTTACCGGATATACAAAAAGAAATGCACGGACGGTTTCCACTC