1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
GGTCGAAAGTTTTCAGTTCAAGGTCTTTTGGGGAAAGAAATGTGTTCCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtgctttctttaattgtcattttaattttgtatataatttgatttcaatttttcattttaacatatatttgttgcag
species | Glycine max |
transcript | GLYMA08G19310.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAG GATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTAEST: gi|192307706|gb|FK001650.1|FK001650
genomic: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtg ... tttgttgcagGATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTA
EST: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAG GATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTAEST: gi|51338331|gb|CO982197.1|CO982197
genomic: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtg ... tttgttgcagGATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTA
EST: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAG GATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTAEST: gi|151397882|gb|EV267755.1|EV267755
genomic: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtg ... tttgttgcagGATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTA
EST: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAG GATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTAEST: gi|9439775|gb|BE440289.1|BE440289
genomic: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtg ... tttgttgcagGATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTA
EST: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTAGGCACCACAG GATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTAEST: gi|193658135|gb|FK602568.1|FK602568
genomic: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtg ... tttgttgcagGATTATCACCGTTTCCATTTTCCAGTATCAGGAATTATTGAGCAATCTGTA
EST: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAG GATTATCACCGTTTCCATTTTCCAGTATCAEST: gi|193424345|gb|FK386414.1|FK386414
genomic: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtg ... tttgttgcagGATTATCACCGTTTCCATTTTCCAGTATCA
EST: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAG GATTATCACCGTTTCC
genomic: CCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtg ... tttgttgcagGATTATCACCGTTTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTCGAAAGTTTTCAGTTCAAGGTCTTTTGGGGAAAGAAATGTGTTCCAGTGCTTTTGTTGATGGACCAATGGTGATTTTCCGTTTGGCACCACAGgtgaatggtgctttctttaattgtcattttaattttgtatataatttgatttcaatttttcattttaacatatatttgttgcag
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