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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGAGGTTCAATCTGCGTGGAAACTTTCCTCTTCTAACAACTAAGgcatgtattagagattatggtttaagatgtgtttgatctgctgtgtaaaataacttgtcttttgtgtgaattcttttctttttcctttggttttgataattattgtgtttactactttggatgtttgctatggaaggggaatatctatttgtaaattttgatagagaatttgacttgatttcttcgattgattgtag

Basic information

species Glycine max
transcript GLYMA06G01280.3
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298168442|gb|HO009372.1|HO009372
EST:     ATGAGGTTCAATCTGCGTGGAAACTTTCCTCTTCTAACAACTAAG                         AAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATC
genomic: ATGAGGTTCAATCTGCGTGGAAACTTTCCTCTTCTAACAACTAAGgcatgtatta ... ttgattgtagAAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATC
EST: gi|192311470|gb|FK005201.1|FK005201
EST:     TCTGCGTGGAAACTTTCCTCTTCTAACAACTAAG                         AAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGC
genomic: TCTGCGTGGAAACTTTCCTCTTCTAACAACTAAGgcatgtatta ... ttgattgtagAAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGC
EST: gi|192311469|gb|FK005200.1|FK005200
EST:     TCTGCGTGGAAACTTTCCTCTTCTAACAACTAAG                         AAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGC
genomic: TCTGCGTGGAAACTTTCCTCTTCTAACAACTAAGgcatgtatta ... ttgattgtagAAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGC