1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTGACCTCACCGCCGCCGCCCGGCCTGCCCATGCAACCCATGGGACCGGGCGGGCCAGGCGGGCCGGGTATGGGCCCCGGAGGCCCCATGCCGCCGCCAGgtgcgtccagcctggtcagggttttgcgggtagccgtgccagccgtgttagatgggggtcacgtgggggcttttcgtcgggtttgtgtgcctgtgtgggc...
species | Chlamydomonas reinhardtii |
transcript | EDP07835 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGCGGGCCGGGTATGGGCCCCGGAGGCCCCATGCCGCCGCCAG GCATGCCCGGGACTCCCGGCATGGCAATGCCCGGCCCTGACGGAGCGGCATEST: gi|49464799|gb|BP092712.1|BP092712
genomic: GGCGGGCCGGGTATGGGCCCCGGAGGCCCCATGCCGCCGCCAGgtgcgtccag ... cgtatcgcagGCATGCCCGGGACTCCCGGCATGGCAATGCCCGGCCCTGACGGAGCGGCAT
EST: CGGGCCAGGCGGGCCGGGTATGGGCCCCGGAGGCCCCATGCCGTCGCCAG GCATGCCCGGGACTCCCGGCATGGCAATGNCCGGNCCTGACGGAGCGGNATEST: gi|15691896|gb|BI716185.1|BI716185
genomic: CGGGCCAGGCGGGCCGGGTATGGGCCCCGGAGGCCCCATGCCGCCGCCAGgtgcgtccag ... cgtatcgcagGCATGCCCGGGACTCCCGGCATGGCAATGCCCGGCCCTGACGGAGCGGCAT
EST: CGGGCCAGGCGGGCCGGGTATGGGCCCCGGAGGCCCCATGCCGCCGCCAG GCATGCCCGGGACTCCCGGCATGGCAATGCCCGGCCCTGACGGAGCGGCAT
genomic: CGGGCCAGGCGGGCCGGGTATGGGCCCCGGAGGCCCCATGCCGCCGCCAGgtgcgtccag ... cgtatcgcagGCATGCCCGGGACTCCCGGCATGGCAATGCCCGGCCCTGACGGAGCGGCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGACCTCACCGCCGCCGCCCGGCCTGCCCATGCAACCCATGGGACCGGGCGGGCCAGGCGGGCCGGGTATGGGCCCCGGAGGCCCCATGCCGCCGCCAGgtgcgtccagcctggtcagggttttgcgggtagccgtgccagccgtgttagatgggggtcacgtgggggcttttcgtcgggtttgtgtgcctgtgtgggc
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