1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GAGTTTGTGGAGCTGACGCCGGTCAAGATCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAGgtgggtgacggcagccgctgtataaattatactacttactacgcagctgctcggtgggcggcagctggtcgggcgccttgcgcttgcggtcggggtaggg...
species | Chlamydomonas reinhardtii |
transcript | EDP04474 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAG GAGTTCAAGGAGTACTGGACCGCGCACCAGCTEST: gi|161815169|gb|FC105314.1|FC105314
genomic: TCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAGgtgggtgacg ... cgcggtgcagGAGTTCAAGGAGTACTGGACCGCGCACCAGCT
EST: TCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAG GAGTTCAAGGAGTACTGGACCGCGCACCAGCTCAAGCCCGCGGACATGAAGEST: gi|161811907|gb|FC096097.1|FC096097
genomic: TCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAGgtgggtgacg ... cgcggtgcagGAGTTCAAGGAGTACTGGACCGCGCACCAGCTCAAGCCCGCGGACATGAAG
EST: TCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAG GAGTTCAAGGAGTACTGGACCGCGCACCAGCTCAAGCCCGCGGACATGAAGEST: gi|161821457|gb|FC109752.1|FC109752
genomic: TCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAGgtgggtgacg ... cgcggtgcagGAGTTCAAGGAGTACTGGACCGCGCACCAGCTCAAGCCCGCGGACATGAAG
EST: TCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAG GAGTTCAAGGAGTACTGGACCGCGCACCAGCTCAAGCCCGCGGACATGAAG
genomic: TCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAGgtgggtgacg ... cgcggtgcagGAGTTCAAGGAGTACTGGACCGCGCACCAGCTCAAGCCCGCGGACATGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGTTTGTGGAGCTGACGCCGGTCAAGATCTGCTTTGACCTGGTTGACGCGGACGGCGACGGCTTCATCACAGTTGAGgtgggtgacggcagccgctgtataaattatactacttactacgcagctgctcggtgggcggcagctggtcgggcgccttgcgcttgcggtcggggtaggg
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