1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGTCGAGTACAAGAACTGCTGGAAGGGAATCGGCTGCCCGGTCAAGCTTTCTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactggttccgtgggctctccctctgggccctgctgcgctcagattctggcaatgggcagctgtgttggattgtcctcaagtcactggggtcata...
species | Chlamydomonas reinhardtii |
transcript | EDP04436 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTG TTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCCEST: gi|14227718|gb|BG846534.1|BG846534
genomic: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactg ... atgcctacagTTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCC
EST: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTG TTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCCEST: gi|15700841|gb|BI725146.1|BI725146
genomic: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactg ... atgcctacagTTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCC
EST: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTG TTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCCEST: gi|15700843|gb|BI725148.1|BI725148
genomic: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactg ... atgcctacagTTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCC
EST: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTG TTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCCEST: gi|10787575|gb|AV644247.1|AV644247
genomic: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactg ... atgcctacagTTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCC
EST: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTG TTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCCEST: gi|15700842|gb|BI725147.1|BI725147
genomic: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactg ... atgcctacagTTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCC
EST: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTG TTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCCEST: gi|10783422|gb|AV640094.1|AV640094
genomic: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactg ... atgcctacagTTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCC
EST: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTG TTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCC
genomic: CTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactg ... atgcctacagTTCCTGGGCTTCTTCGCTGACCGCATCGGCCGCAAATGGGGCAGTGTCGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTCGAGTACAAGAACTGCTGGAAGGGAATCGGCTGCCCGGTCAAGCTTTCTGAATCAATTACCTACACGCAAGTGTGCGGCATCATCTTTGGCCAGCTGgtgcgtactggttccgtgggctctccctctgggccctgctgcgctcagattctggcaatgggcagctgtgttggattgtcctcaagtcactggggtcata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tctgggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgtgttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gattgtc