1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatgtactttagttttgtaggatcagtttttgtaaatagctattattacctcttgatgtctgatcatacgctatactaaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTGGAATATACATCAACCGTGACTGATGTGATTCAA
species | Arabidopsis thaliana |
transcript | AT3G54060.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116412383|gb|EG454975.1|EG454975
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116384859|gb|EG427451.1|EG427451
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116384866|gb|EG427458.1|EG427458
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGCCCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGCCCACCCCTTTTTEST: gi|116384864|gb|EG427456.1|EG427456
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCACGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116412294|gb|EG454886.1|EG454886
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGEST: gi|116412372|gb|EG454964.1|EG454964
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGG
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTTTGACCAGCCCTTTTTEST: gi|116412394|gb|EG454986.1|EG454986
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGCCCAGCCCTTTTTEST: gi|116385105|gb|EG427697.1|EG427697
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116384858|gb|EG427450.1|EG427450
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116385102|gb|EG427694.1|EG427694
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCCGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116412427|gb|EG455019.1|EG455019
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCAAGTCTGACCAGCCCTTTTTEST: gi|116384868|gb|EG427460.1|EG427460
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116412350|gb|EG454942.1|EG454942
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCCTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTEST: gi|116394639|gb|EG437231.1|EG437231
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGG-ATTGTAATCTCGAGTCTGACCAGCCCTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTEST: gi|116412316|gb|EG454908.1|EG454908
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
EST: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGG GTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
genomic: AATCATTGCTTGTCACTGACCCCAAATCAACCCACTCAAACTGTTTCAGGgtatgtactt ... taaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTT
gtaaatagctattattacctcttgatgtctgatcatacgctatactaaatcacagGTCGTCTCCTGAATCAGGGGATTGTAATCTCGAGTCTGACCAGCCCTTTTTGGAATATACATCAACCGTGACTGATGTGATTCAA
tactaaa putative branch site (score: 1)
tatactaaat TA-rich tract