1 5' 3' | 2 5' 3' | 3 5' 3' |
TACAGATCTTAAAGATATGCCTAAGAGAGAGCTTAGAGTTGCTTCTAATCAGATCCTCTCTCTTTTTCAAGATAATTACCCTGAATTGGTTGCTACTAAGgtaaagaaaatttctctgtcttttgtttttctcttatgtttctattggagacagaaaatttatgtttctgtacttgttgtctgaattgttacggtttttt...
species | Arabidopsis thaliana |
transcript | AT3G51670.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGATCCTCTCTCTTTTTCAAGATAATTACCCTGAATTGGTTGCTACTAAG ATATTCATAAACGTGCCTTGGTACTTCAGTGTGATCTACTCAATGTTCAGCEST: gi|124774501|gb|EH864630.1|EH864630
genomic: AGATCCTCTCTCTTTTTCAAGATAATTACCCTGAATTGGTTGCTACTAAGgtaaagaaaa ... actatttcagATATTCATAAACGTGCCTTGGTACTTCAGTGTGATCTACTCAATGTTCAGC
EST: AGATCCTCTCTCTTTTTCAAGATAATTACCCTGAATTGGTTGCTACTAAG ATATTCATAAACG
genomic: AGATCCTCTCTCTTTTTCAAGATAATTACCCTGAATTGGTTGCTACTAAGgtaaagaaaa ... actatttcagATATTCATAAACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACAGATCTTAAAGATATGCCTAAGAGAGAGCTTAGAGTTGCTTCTAATCAGATCCTCTCTCTTTTTCAAGATAATTACCCTGAATTGGTTGCTACTAAGgtaaagaaaatttctctgtcttttgtttttctcttatgtttctattggagacagaaaatttatgtttctgtacttgttgtctgaattgttacggtttttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctctgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tttctctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gacagaaa