1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaaagttctctttaaccttttattggttgcttttgagttatacacaccacaccacaccattacatgtttcttactatgaggtatattcgataaaagcagACCCGGGATTTGGTATTGGCTGCTTGGGAAAGCTGAACTCTGCATACGAAAACGATAAAGAGTTGATGATTGGTTTCTACAAGTTTCTCGCAAA
species | Arabidopsis thaliana |
transcript | AT3G27050.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CAACTACTATTCAAGAGGAGATATTCTTGGAGATGGGGATTG ACCCGGGATTTGGTATTGGCTGCTTGGGAAAGCTGAACTCTGCATACGAAAEST: gi|124869761|gb|EH954198.1|EH954198
genomic: CAACTGCTATTCAAGAGGAGATATTCTTGGAGATGGGGATTGgtaaagttct ... ataaaagcagACCCGGGATTTGGTATTGGCTGCTTGGGAAAGCTGAACTCTGCATACGAAA
EST: AGCGGTAACAACTGCTATTCAAGAGGAGATATTCTTGGAGATGGGGATTG ACCCGGGATTTGGTATTGGCTGCTTGGGAAAGCTGAACTEST: gi|124866714|gb|EH951151.1|EH951151
genomic: AGCGGTAACAACTGCTATTCAAGAGGAGATATTCTTGGAGATGGGGATTGgtaaagttct ... ataaaagcagACCCGGGATTTGGTATTGGCTGCTTGGGAAAGCTGAACT
EST: AGGAGATATTCTTGGAGATGGGGATTG ACCCGGGATTTGGTATTGGCTGCTTGGGAAAGCTGAACTCTGCATACGAAA
genomic: AGGAGATATTCTTGGAGATGGGGATTGgtaaagttct ... ataaaagcagACCCGGGATTTGGTATTGGCTGCTTGGGAAAGCTGAACTCTGCATACGAAA
caccacaccacaccattacatgtttcttactatgaggtatattcgataaaagcagACCCGGGATTTGGTATTGGCTGCTTGGGAAAGCTGAACTCTGCATACGAAAACGATAAAGAGTTGATGATTGGTTTCTACAAGTTTCTCGCAAA
ttcttac putative branch site (score: 2)
tatattcgataaaa TA-rich tract