1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtttttaactttttgccttagatttttgtttgaatttgtttcatgtagctccatgcttgatatgtgttgattcttttgtagGTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTTGTTTTGACTGCTTCTGCTGACAAG
species | Arabidopsis thaliana |
transcript | AT2G33340.3 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ATCGCCCTTCTGGACAAATCTTGTCAACACTGACTGGTCACTCGAAGAAG GTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTTGTTTTGACTGCTTCTEST: gi|116472806|gb|EG515398.1|EG515398
genomic: ATCGCCCTTCTGGACAAATCTTGTCAACACTGACTGGTCACTCGAAGAAGgtttttaact ... tcttttgtagGTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTTGTTTTGACTGCTTCT
EST: ATCGCCCTTCTGGACAAATCTTGTCAACACTGACTGGTCACTCGAAGAAG -TTACAAGCGTAAAATTTGTAGGCGACTCTGATCTTEST: gi|86059921|gb|DR355678.1|DR355678
genomic: ATCGCCCTTCTGGACAAATCTTGTCAACACTGACTGGTCACTCGAAGAAGgtttttaact ... tcttttgtagGTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTT
EST: ATCGCCCTTCTGGACAAATCTTGTCAACACTGACTGGTCACTCGAAGAAG GTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTTGTTTTGACTGCTTCTEST: gi|124932360|gb|EL009628.1|EL009628
genomic: ATCGCCCTTCTGGACAAATCTTGTCAACACTGACTGGTCACTCGAAGAAGgtttttaact ... tcttttgtagGTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTTGTTTTGACTGCTTCT
EST: ATCGCCCTTCTGGACAAATCTTGTCAACACTGACTGGTCACTCGAAGAAG GTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTT
genomic: ATCGCCCTTCTGGACAAATCTTGTCAACACTGACTGGTCACTCGAAGAAGgtttttaact ... tcttttgtagGTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTT
tgtttgaatttgtttcatgtagctccatgcttgatatgtgttgattcttttgtagGTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTTGTTTTGACTGCTTCTGCTGACAAG
tgttgat putative branch site (score: 4)
ttcttttgt CT-rich tract
aatttgttt TA-rich tract