1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaatacgcaaatatttttttggtttaaattttcatgcatgtactattcgttttaattacttcaatataaaaaaggtaccatcttttgttattgtagGGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTGCTGTGTTGTGCAATAAAATCACATCTTCTGTATGTCCCGACGTGTCTAC
species | Arabidopsis thaliana |
transcript | AT1G75900.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TAATATCTATGATCCTCTTTTTGACATCATCCAGAATCCTGCAAATTATG GGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTGEST: gi|86078830|gb|DR374587.1|DR374587
genomic: TAATATCTATGATCCTCTTTTTGACATCATCCAGAATCCTGCAAATTATGgtaatacgca ... gttattgtagGGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTG
EST: TAATATCTATGATCCTCTTTTTGACATCATCCAGAATCCTGCAAATTATG GGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTGEST: gi|86081430|gb|DR377187.1|DR377187
genomic: TAATATCTATGATCCTCTTTTTGACATCATCCAGAATCCTGCAAATTATGgtaatacgca ... gttattgtagGGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTG
EST: TAATATCTATGATCCTCTTTTTGACATCATCCAGAATCCTGCAAATTATG GGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTGEST: gi|19797000|gb|AU229027.1|AU229027
genomic: TAATATCTATGATCCTCTTTTTGACATCATCCAGAATCCTGCAAATTATGgtaatacgca ... gttattgtagGGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTG
EST: TAATATCTATGATCCTCTTTTTGACATCATCCAGAATCCTGCAAATTATG GGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTG
genomic: TAATATCTATGATCCTCTTTTTGACATCATCCAGAATCCTGCAAATTATGgtaatacgca ... gttattgtagGGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTG
actattcgttttaattacttcaatataaaaaaggtaccatcttttgttattgtagGGTTTGAAGTGTCTAATAAAGGATGCTGTGGAACAGGAGCCATAGAAGTTGCTGTGTTGTGCAATAAAATCACATCTTCTGTATGTCCCGACGTGTCTAC
ttttaat putative branch site (score: 3)
tcttttgtt putative PPT
ttttaattacttcaat TA-rich tract