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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTACCTCATGTAAATTCTGGCGGCAAGTGGGAGAGTCTTTCAAACCTCCAAAgtaaggaataacatacagtttcttgtcttaatcttctttgtggctctgaaaatgaaaaattatcttgtattagtttgttgcatcttttttgtttagtttc...

Basic information

species Glycine max
transcript GLYMA16G21840.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G21840.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv04s0044g01840.t01 (Vitis vinifera), 5'ss of exon 4
GTTACCTCATGTAAATTCTGGCGGCAAGTGGGAGAGTCTTTCAAACCTCCAAAgtaaggaa--taacatacagtttcttgtcttaatcttctttgtggctctgaaaatgaaaaattatcttgtattagtttgttgcatcttttttgtttagtttc--
|| || ||||| ||| | |||||||||||||||||||| || ||||| |||||||| |  |  || | ||||  |||   |   |   | ||||||  ||     | ||| |  |  |  | |  |  | |    ||| ||   |    | |     
GTGACTTCATGCAAACTGTGGCGGCAAGTGGGAGAGTCCTTTAAACCCCCAAAgtatgataattagcttacatattcaaattcca--ttgctttgt--cttatggagtgatagttattgctttgctgctataaaccattttgcctagaaattgatgt