1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...agtatggtgaacaattgctccttcaaaagatcaaataataccaagttcgttgctgtcagtgacaacgggcgtgccatctttgattatccactgtttgcagGAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTGAATAG
species | Physcomitrella patens |
transcript | PP1S55_31V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AGCCCGTAGATTCTGTTGTGGCTCACATTTTGAAGCAAATTTTATCTCAA GAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTGEST: gi|162258292|gb|FC434691.1|FC434691
genomic: AGCCCGTAGATTCTGTTGTGGCTCACATTTTGAAGCAAATTTTATCTCAAgtacgttatt ... ctgtttgcagGAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTG
EST: CATTTTGAAGC-AATTTTATCTCAA GAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTGEST: gi|162258293|gb|FC434692.1|FC434692
genomic: CATTTTGAAGCAAATTTTATCTCAAgtacgttatt ... ctgtttgcagGAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTG
EST: AGCCCGTAGATTCTGTTGTGGCTCACATTTTGAAGCAAATTTTATCTCAA GAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTGEST: gi|208383031|gb|DC927781.1|DC927781
genomic: AGCCCGTAGATTCTGTTGTGGCTCACATTTTGAAGCAAATTTTATCTCAAgtacgttatt ... ctgtttgcagGAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTG
EST: AGCCCGTAGATTCTGTTGTGGCTCACATTTTGAAGCAAATTTTATCTCAA GAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTGEST: gi|162256015|gb|FC431779.1|FC431779
genomic: AGCCCGTAGATTCTGTTGTGGCTCACATTTTGAAGCAAATTTTATCTCAAgtacgttatt ... ctgtttgcagGAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTG
EST: ATTTTGAAGCAAA-TTTATCTCAA GAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTGEST: gi|7067110|gb|AW496965.1|AW496965
genomic: ATTTTGAAGCAAATTTTATCTCAAgtacgttatt ... ctgtttgcagGAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTG
EST: AGCCCGTAGATTCTGTTGTGGCTCACATTTTGAAGCAAATTTTATCTCAA GAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTG
genomic: AGCCCGTAGATTCTGTTGTGGCTCACATTTTGAAGCAAATTTTATCTCAAgtacgttatt ... ctgtttgcagGAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTG
ttcgttgctgtcagtgacaacgggcgtgccatctttgattatccactgtttgcagGAGACAAACTATGTGCCTATCAAACCAGGGAGTCGAGTTGTGCTCATGGTGAATAG
ctttgat putative branch site (score: 96)
tttgattat TA-rich tract