1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtacgccaagtatttggatgatgcatggagttggagtgagcgattttgatttgccttgtgtgaaaaataagatgctggatgctctctctcgcctcgcagGTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCCTGCGATACAACCACAACTCGTGGTCAAAG
species | Zea mays |
transcript | GRMZM2G471269_T05 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCG GTCCCATCAGATTCGTCCTGGAACEST: gi|211348131|gb|FL378229.1|FL378229
genomic: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaag ... cgcctcgcagGTCCCATCAGATTCGTCCTGGAAC
EST: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCG GTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCCTGCEST: gi|211073389|gb|FL369067.1|FL369067
genomic: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaag ... cgcctcgcagGTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCCTGC
EST: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCG GTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCEST: gi|211214594|gb|FL385235.1|FL385235
genomic: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaag ... cgcctcgcagGTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGC
EST: ACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTTACGAGATCG GTTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTEST: gi|211425791|gb|FL370217.1|FL370217
genomic: ACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCT-ACGAGATCGgtacgccaag ... cgcctcgcagGT-CCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCT
EST: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCG GTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCTTGC
genomic: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaag ... cgcctcgcagGTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCCTGC
tttgatttgccttgtgtgaaaaataagatgctggatgctctctctcgcctcgcagGTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCCTGCGATACAACCACAACTCGTGGTCAAAG
ttttgat putative branch site (score: 4)
tgctctctctcgcctc putative PPT
aaaaataagat TA-rich tract