1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GAGTCCGGCGCCGCCGCCGCCGCCGATGACACCCCTTTCCTCTTCTGGCTCACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaagtatttggatgatgcatggagttggagtgagcgattttgatttgccttgtgtgaaaaataagatgctggatgctctctctcgcctcgcag
species | Zea mays |
transcript | GRMZM2G471269_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCG GTCCCATCAGATTCGTCCTGGAACEST: gi|211348131|gb|FL378229.1|FL378229
genomic: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaag ... cgcctcgcagGTCCCATCAGATTCGTCCTGGAAC
EST: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCG GTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCCTGCEST: gi|211073389|gb|FL369067.1|FL369067
genomic: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaag ... cgcctcgcagGTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCCTGC
EST: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCG GTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCEST: gi|211214594|gb|FL385235.1|FL385235
genomic: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaag ... cgcctcgcagGTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGC
EST: ACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTTACGAGATCG GTTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTEST: gi|211425791|gb|FL370217.1|FL370217
genomic: ACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCT-ACGAGATCGgtacgccaag ... cgcctcgcagGT-CCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCT
EST: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCG GTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCTTGC
genomic: CACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaag ... cgcctcgcagGTCCCATCAGATTCGTCCTGGAACCCTACAACGGCACCCTGCCGCGCCTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGTCCGGCGCCGCCGCCGCCGCCGATGACACCCCTTTCCTCTTCTGGCTCACCGGCGGCGACCGCTGCTCCGTCTTCAGCGGCCTCGCCTACGAGATCGgtacgccaagtatttggatgatgcatggagttggagtgagcgattttgatttgccttgtgtgaaaaataagatgctggatgctctctctcgcctcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC