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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...agttagttctcccatgcccactttcatgtgctgatcaggcaacctttcttctcagtaccgaacgtctcggttgctacacagtgtcgctgctcggctacagAAACACAGCAAGACGCTTGGAGGTTTCGGTGCGTGGAATAGATGTCTGAACCATCTGCTTACGCTCGCAGAATCACACATCGAGTCTGTCATCCTTGCAA

Basic information

species Zea mays
transcript GRMZM2G419782_T01
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G419782_T02 (Zea mays), 3'ss of exon 5
lower sequence: LOC_Os11g39220.2 (Oryza sativa), 3'ss of exon 3
---------------------agttagttctcccatgcccactttcatgtgctgatcaggcaacctttcttctcagtaccgaacgtctcggttgctacacagtgtcgctgctcggctacagAAACACAGCAAGACGCTTGGAGGTTTCGGTGCGTGGAATAGATGTCTGAACCATCTGCTTACGCTCGCAGAATCACACATCGAGTCTGTCATCCTTGCAA
                     |  |  ||     |||   |  ||||| | |||||  |  |   ||||||| ||||||||||| ||||| || || ||||| || || ||||| || ||||| || ||||||||||||||||| || ||||| |||||||||||| | |||||||                                             
gtaagtcatatctgcgtaatgatctcattacagaatgtataaattcatatactgattcgatagattttcttcgcagTACCGAACATCTCGATTACTGCACAGCGTTGCCGCTCGACTCCAGAAGCATAGCAAGACGCTTGGAGGATTTGGTGCATGGAATAGATGTTTAAACCATC---------------------------------------------