1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gttcttttttctttctaaattcctcagatgtaactggcaactagttctctgcacaatagtaatctaggaacattgatcataaggaagagtaatccccttgaactaataacgattttgcatttcagCAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGCGGTCTTGAGTTCCTTCACAG
species | Zea mays |
transcript | GRMZM2G409430_T02 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: AACAGTTATTCGAACACATTGGGAAGTCAGTGACAGACGATAGTTTTAAG CAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGCEST: gi|211170139|gb|FL323713.1|FL323713
genomic: AACAGTTATTCGAACACATTGGGAAGTCAGTGACAGACGATAGTTTTAAGgttctttttt ... tgcatttcagCAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGC
EST: AACAGTTATTCGAACACATTGGGAAGTCAGTGACAGACGATAGTTTTAAG CAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGCEST: gi|24766432|gb|CA401586.1|CA401586
genomic: AACAGTTATTCGAACACATTGGGAAGTCAGTGACAGACGATAGTTTTAAGgttctttttt ... tgcatttcagCAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGC
EST: AACAGTTATTCGAACACATTGGGAAGTCAGTGACAGACGATAGTTTTAAG CAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGCEST: gi|7216514|gb|AW562636.1|AW562636
genomic: AACAGTTATTCGAACACATTGGGAAGTCAGTGACAGACGATAGTTTTAAGgttctttttt ... tgcatttcagCAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGC
EST: AACAGTTATTCGAACACATTGNGAAGTCAGTGACAGACGATAGTTTTAAG CAATGGGAAGGGCTGCTCGAGC
genomic: AACAGTTATTCGAACACATTGGGAAGTCAGTGACAGACGATAGTTTTAAGgttctttttt ... tgcatttcagCAATGGGAAGGGCTGCTCGAGC
cattgatcataaggaagagtaatccccttgaactaataacgattttgcatttcagCAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGCGGTCTTGAGTTCCTTCACAG
taataac putative branch site (score: 20)
aactaataa TA-rich tract