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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcggtactgtttatttggttttgctgcataagtttcgaatagtaattatgttttatttatatgcag

Basic information

species Zea mays
transcript GRMZM2G361847_T04
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: LOC_Os07g48820.2 (Oryza sativa), 5'ss of exon 9
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct--acttt----gtatctttgtggggcggtactgtttatttggttttgctgcataa-gtttcgaat-agtaattatgttttatttatatgcag---------------------------------------
||||||| || |||| ||||| || |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| ||| |||| | ||| ||||  || ||    || || | ||    | |  |||   |  ||| |||  |   |   | ||||  | ||   |    |||    |   |  ||                                       
TCTCGGTTCATCAGGGTCTTCTGGGAATGTGGCGAACTACATGGGTCAGATGGCAATGGCCATGGGTAAACTAGGAACGCTCGAGAATTTCCTTTGCCAGgcaagtatcttcaccttctaagtgtcatcgttcttctgc-ctgacaacatggatttattaactggtgattcgtgtcagatgtcgcctttgcagtgattaaagcttagattttgactattcttttggtttcatttttgtcag

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: GLYMA20G39050.1 (Glycine max), 5'ss of exon 11
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtgggg-cggtactgtttatttggttttgctgcataag---tttcgaatagtaatt-atgtt---ttatttatatgcag------------------------------------------------------
 || ||  |  | ||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| || |||   ||  ||   || |||| | | |  |    |  | |  | |  | ||   ||| ||||  | |    | | | |   ||||  | || | || |||     ||||| ||||  |                                                       
ACTTGGCTCCTCTGGTTCATCAGGCAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAACTAGGGACACTTGAGGGGTTCATTAAGCAGgtaaacttttcttactcacatgtacgcgatcagtttggttcatttt-tctcaaagaaaatgctctttcatacagcatttcatggcagattattgatatcaaacatcactattaaaataacttagctctgttcatttttgtggtggtcatttgaaag

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: GLYMA10G44270.1 (Glycine max), 5'ss of exon 9
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtgggg-cggtactgtttatttggttttgctgcataag---tttcgaatagtaatt-atgtt---ttatttatatgcag---------------------------------------------------
 || ||  |  | ||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| || |||   ||  ||   || ||| || | |  |    |  | |||| |  | ||   ||  || |  | |    | | | |   ||||  | || | || |||     ||||| |||   |                                                    
ACTTGGCTCCTCTGGTTCATCAGGCAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAACTAGGGACACTTGAGGGATTCATTAAGCAGgtatgcttttcttactcacatgtgtgcgatcagtttggtacatatt-tctcaaagaaaatgctctttcatacagcatttcatggcagattattgataacaaacatcactattaaaataacttggctctgtttatttttgtggtcatttgaaag

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: GLYMA03G28320.1 (Glycine max), 5'ss of exon 11
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttg-tatctttgtggggcggtactgtttatttggttttgctgcataagtttcgaatagt----aattat----gttttatttatatgcag
 | | |  || |||| || || |||||||||||||| |||||||| || ||||| ||||||||||| || || || || || |||   ||||||| ||| ||| ||   |  |  | | |  || ||       |   |  || |  ||    |  | |    ||    ||     ||||||    |||| |||||||||   
GCCCAGCTCATCAGGCTCCTCGGGAAATGTGGCAAATTACATGGGGCAAATGGCTATGGCCATGGGAAAGCTTGGTACACTTGAGGGGTTTCTTCACCAGgtacgctcattttccggtctaattctgttttctcaacttccatctttttgaaataaagagaactcaggaagctttgaattatctgagtttaatttatatg---

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: GLYMA13G26280.1 (Glycine max), 5'ss of exon 11
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcggtactgtttatttggttttgctgcataagtttcgaatagtaattatgttttatttatatgcag----------
 |  |   || | ||||| ||||| ||||||||||  ||||||||||| |||||||||||||||||||| || ||||| |||||    ||  |||  || |||      |  ||  |    ||||  | |  ||  ||||  |  |  ||  || ||| ||   ||  |||  ||  ||      |  ||              
ACCTGCCTCATCTGGTTCATCAGGGAATGTGGCAAGTTACATGGGTCAAATGGCCATGGCCATGGGCAAGCTAGGGACACTAGAAGGGTTCATTCAACAGgtacattcttctttgttgcacttgtatgccaata--gtttgct--gcattagtgaataggtgaggacgagtcttttagtccagccttgatttcctaatattatt

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: GLYMA15G37220.1 (Glycine max), 5'ss of exon 7
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcggtactgtttatttggttttgctgcataagtttcgaatagtaattatgttttatttatatgcag----------
 |  |   || | ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| || || ||||| || ||    ||  |||  || |||    | |  ||  |    ||||       ||  ||||  |     ||| || ||||||   ||| | |  ||  ||      |  ||              
ACCTGCCTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCCATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTCATTCAACAGgtacttttttctttgttgcacttgtatacaaata--gtttgct--acattggtgaataagtgaagaagaatcttttagtccagccttgatttcctaatattatt

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: AT5G06950.3 (Arabidopsis thaliana), 5'ss of exon 9
---TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcggtactgtttatttggttttgctgcataagtt--tcgaatagtaattatgttttatttatatgcag---
   ||| ||| |   | |||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| ||  | || || || ||    ||| | ||||| |||  || |    ||||    || || |  | ||   ||  ||  |  |   |  |||  |   | |  || ||||  | | ||  ||    |  |   
GACTCTTGGTTC---AAGTTCATCAGGGAATGTCGCAAGCTACATGGGTCAGATGGCCATGGCAATGGGAAAGTTAGGTACACTCGAAGGATTTATCCGCCAGgta--caaca--cttgtgatgttttgagatgatatc-ttagttaagagtatatatatatatcaataggttaataatcgtctcttggttggtggtggcag

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: AT5G06960.1 (Arabidopsis thaliana), 5'ss of exon 8
---TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcggtactgtttatttggttttgctgcataagtttcgaatagtaattatgtt-ttatttatatgcag
   ||||||| |   | |||| ||||| ||||| || | |||||||||||||||||||||||| ||||| ||  | || || || ||    ||| | ||||| ||| |   | | |||||   ||           | ||   |     |||||| |  | ||||    |||| ||  || || || ||| |  ||||
GACTCTCGGTTC---AAGTTCATCAGGGAATGTAGCTAGCTACATGGGTCAGATGGCCATGGCGATGGGGAAGTTAGGTACCCTTGAAGGATTTATCCGCCAGgtacgttacaattttgttgtttaacatca----aatgaaaaaagtattttgcag--tcagtt---gatag-aaccatcttattgtttgtg-gcag

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: AT3G12250.5 (Arabidopsis thaliana), 5'ss of exon 9
---TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcg----gtactgtttatttggttttgctgcataagtttcgaatagtaattatgt-tttatttat-atgcag-------------------------
   ||| ||| |     |||| || |  ||||| || | |||||||||||||||||||||||| |||||  |  | || || || ||    ||  | ||||| |||       | | || || ||   | |        ||   |||  | |          |||| | |   ||  ||  ||||  |   | | | ||| ||                         
AACTCTTGGTTC---CAGTTCATCGGATAATGTCGCGAGCTACATGGGTCAGATGGCCATGGCAATGGGGCAGTTAGGCACCCTCGAAGGATTCATACGCCAGgtactttagaaatgtggatgttatcgagatataccatatcttttcatcgtcacaaagagataaatattttattttatatatgaatccgtctgttatggagttcatagggcatttcttggtggcag

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: Vv13s0084g00660.t01 (Vitis vinifera), 5'ss of exon 11
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct--actttgtatctttgtggggcggtactgtttatttggttttgct-gcataagtttcgaatagtaattatgtttta--tttatatgcag-
||| ||  |  | ||||| || ||||||||||||||||| |||||||| ||||||||||||||||| || || ||||| || |||   ||| |||| || |||  | |    |  || |   ||| |     |  | |    ||    | ||| |   || |   ||   |  | || |      |  ||   |    | 
TCTTGGCTCTTCTGGTTCATCTGGAAATGTGGCAAACTATATGGGTCAAATGGCCATGGCCATGGGAAAGCTGGGGACTCTTGAGGGGTTTATTCGTCAGgtattccttctaaagttttgattttctttcctgacaataagaataaaatcttgatcatattatggtctgtttatgatcaaccagaaagttaggaaatgga

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: Vv08s0007g05170.t01 (Vitis vinifera), 5'ss of exon 10
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtgg--ggcggtactgtttatttggttttgct-gcataagtttcgaatagtaattatgttttatttatatgcag----
 |  || ||| | || || ||||| |||||||||||||| ||||| |||||||||||||| ||||| || || ||||| || |||   |||||||| || |||| |  |   || || |  | |  |  |   | | ||   | |||  |      |||   ||  | ||||  |||||| | ||  || | |||      
ACCTGGCCCATCTGGATCATCAGGGAATGTGGCAAACTATATGGGCCAGATGGCCATGGCAATGGGTAAGCTAGGGACTCTTGAGGGATTTCTTCGTCAGgtaatctcccttttagtttagtggaagttgtaaggaatgaaaacttgaatgcatcagcagtggtggcaaataa-aattatttatttattttttgctatcaa

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: EFJ18699 (Selaginella moellendorffii), 5'ss of exon 2
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcggtactgtttatttggttttgctgcataagtttcgaatagtaattatgttttatttatatgcag
|  |||  |    ||    ||    || || || ||||||||||| || ||||||||||| ||||| || ||||| || || ||||| ||| ||||||| |||| |     |   | |||||| |    || |  |  || |||||    |                                           
TGCCGGCTCTCTGGGAAACTCCCCCAACGTAGCGAACTACATGGGACAAATGGCCATGGCAATGGGAAAGCTCGGAACTCTCGAGAACTTTGTTCGCCAGgtaa-cgcgagccgcg-atctttctttctcgctgataattctttggcgcag-------------------------------------------

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: EFJ22847 (Selaginella moellendorffii), 5'ss of exon 5
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcggtactgtttatttggttttgctgcataagtttcgaatagtaattatgttttatttatatgcag------
    ||  |    ||  | ||    || || |||||||||||||| |||||||| ||||||||||| || ||||| || || || || ||| |||| || ||||      ||| | | |  || |       |       | ||  | ||| |       |    |||   | || ||  ||| || |   |||      
CTCGGGATCGCTGGGGGCCTCGTCCAACGTCGCAAACTACATGGGACAGATGGCTATGGCCATGGGGAAGCTCGGCACTCTGGAAAACTTTGTTCGTCAGgtaaagccaaactctttcttcttcttttttcatttccagcagtttttcttggtcttgctctccataatgaaagttctgccttagttttccacagcttttt

upper sequence: GRMZM2G361847_T04 (Zea mays), 5'ss of exon 9
lower sequence: EFJ30797 (Selaginella moellendorffii), 5'ss of exon 6
TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatctactttgtatctttgtggggcggtactgtttatttggttttgctgcataagtttcgaatagtaattatgttttatttatatgcag------
    ||  |    ||  | ||    || || |||||||||||||| |||||||| ||||||||||| || ||||| || || || || ||| |||| || ||||      ||| | | |  || |       |       | ||  | ||| |       |    |||   | || ||  ||| || |   |||      
CTCGGGATCGCTGGGGGCCTCGTCCAACGTCGCAAACTACATGGGACAGATGGCTATGGCCATGGGGAAGCTCGGCACTCTGGAAAACTTTGTTCGTCAGgtaaagccaaactctttcttcttcttttctcttttccagcagtttttcttggtcttgctctccataatgaaagttttgccttagttttccacagcttttt

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71764605|gb|DR962542.1|DR962542
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAANNNNNNNCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|60351435|gb|DN218408.1|DN218408
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAANNNNNNNCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|211538621|gb|FL477997.1|FL477997
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|211475614|gb|FL459205.1|FL459205
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|13381792|gb|BG458467.1|BG458467
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAGCGNNNNNNNACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|71761438|gb|DR959375.1|DR959375
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|18659659|gb|BM500456.1|BM500456
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|71428738|gb|DR809788.1|DR809788
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|211059408|gb|FL477632.1|FL477632
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|44901587|gb|CK828132.1|CK828132
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
EST: gi|211475615|gb|FL459206.1|FL459206
EST:     TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAA                         GCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG
genomic: TGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 22

TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACGATCCGACAGGCTTCTCGTGCTCTTCTTGCAATCCACGACTATTTTTCAC


Block sizes: 49 (upstream exon), 40 (downstream exon)
Score: 27

TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACGATCCGACAGGCTTCTCGTGCTCTTCTTGCAATCCACGACTATTTTTCAC


Block sizes: 49 (upstream exon), 47 (downstream exon)
Score: 24

TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACGATCCGACAGGCTTCTCGTGCTCTTCTTGCAATCCACGACTATTTTTCAC


Block sizes: 48 (upstream exon), 37 (downstream exon)
Score: 14

TCTCGGTCCAGCAGGTTCTTCAGGAAATGTGGCAAACTACATGGGTCAGATGGCCATGGCCATGGGCAAACTCGGGACGCTAGAGAATTTTCTTCGCCAAgtaagcatct ... ttatatgcagGCCGACAACCTGCGACAGCAGACGTTGCATCAAATGCAACGTATCCTAACGATCCGACAGGCTTCTCGTGCTCTTCTTGCAATCCACGACTATTTTTCAC