1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CGCGAGCACAGCTCCGCCGCCACCGCCCCCTTCTCATCCGCGGTCTCCTCCGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacctttgctcggatgagttctttcgttcaaagtgaggattcggtagtggtgttctcaatcaaacccaaatcgatgttttcgccattccgatccagttaaccgtccatttttgtgctgcgtggtattacccagctaacgcaatccaatctatccggccttggtttgatag
species | Zea mays |
transcript | GRMZM2G124051_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|149039469|gb|EE046609.2|EE046609
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|211532376|gb|FL244241.1|FL244241
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|211529376|gb|FL244234.1|FL244234
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|211532377|gb|FL244242.1|FL244242
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|148947123|gb|EC892433.2|EC892433
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|211532380|gb|FL244245.1|FL244245
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|211532373|gb|FL244238.1|FL244238
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|211532371|gb|FL244236.1|FL244236
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|149078953|gb|EE167793.2|EE167793
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|149082745|gb|EE171964.2|EE171964
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAGEST: gi|211532375|gb|FL244240.1|FL244240
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
EST: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTG GGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
genomic: CGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacc ... ggtttgatagGGTCCTTCGTCAATCGTCAGCGCGCAAGATCGGCACTTGTGTACATCTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCGAGCACAGCTCCGCCGCCACCGCCCCCTTCTCATCCGCGGTCTCCTCCGCCTGCTGCATCTCTATCGATCTAGCGGGACTGGCTCCTTCCCGTGCTGgttagtaacctttgctcggatgagttctttcgttcaaagtgaggattcggtagtggtgttctcaatcaaacccaaatcgatgttttcgccattccgatccagttaaccgtccatttttgtgctgcgtggtattacccagctaacgcaatccaatctatccggccttggtttgatag
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