1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTAAGCAATGGGAAGAGGAGGTGTGCATCTGTAAGAACACATTTGATGCAACCAAACAGTGGTAATCTTTATAGAGATGTGCTGGTGACCAGTTTGGCAGgtataattgctctacgatttttttttacttcactcttctgctgtttattcacctaatcacctgagtgaagtacatgattacccgtctataggaaggtact...
species | Zea mays |
transcript | GRMZM2G087479_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACCAAACAGTGGTAATCTTTATAGAGATGTGCTGGTGACCAGTTTGGCAG AGTTCCCAGGCCTGCTCTTGGCTGCTTTTCTAGTCGACAGGATTGGTCGAAEST: gi|78125243|gb|DV543627.1|DV543627
genomic: ACCAAACAGTGGTAATCTTTATAGAGATGTGCTGGTGACCAGTTTGGCAGgtataattgc ... ttgatgtcagAGTTCCCAGGCCTGCTCTTGGCTGCTCTTCTAGTCGACAGGATTGGTCGAA
EST: ACCAAACAGTGGTAATCTTTATAGAGATGTGCTGGTGACCAGTTTGGCAG AGTTCCCAGGCCTGCTCTTGGCTGCTCTTCTAGTCGACAGGATTGGTCGAAEST: gi|71770232|gb|DR968169.1|DR968169
genomic: ACCAAACAGTGGTAATCTTTATAGAGATGTGCTGGTGACCAGTTTGGCAGgtataattgc ... ttgatgtcagAGTTCCCAGGCCTGCTCTTGGCTGCTCTTCTAGTCGACAGGATTGGTCGAA
EST: ACCAAACAGTGGTAATCTTTATAGAGATGTGCTGGTGACCAGTTTGGCAG AGTTCCCAGGCCTGTTCTTGGCTGCTCTTCTAGTCGACAGGATTGGTCGAA
genomic: ACCAAACAGTGGTAATCTTTATAGAGATGTGCTGGTGACCAGTTTGGCAGgtataattgc ... ttgatgtcagAGTTCCCAGGCCTGCTCTTGGCTGCTCTTCTAGTCGACAGGATTGGTCGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTAAGCAATGGGAAGAGGAGGTGTGCATCTGTAAGAACACATTTGATGCAACCAAACAGTGGTAATCTTTATAGAGATGTGCTGGTGACCAGTTTGGCAGgtataattgctctacgatttttttttacttcactcttctgctgtttattcacctaatcacctgagtgaagtacatgattacccgtctataggaaggtact
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