1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACATGGTGTTAGTCCACTTACTCCAATGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCCgtgagtttttttttactcactcaagtctttctttgaccttgctttttttagttgtacttcactgcactaccaattgtag
species | Zea mays |
transcript | GRMZM2G064804_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCC ATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTGEST: gi|149098929|gb|EE184941.2|EE184941
genomic: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCCgtgagttttt ... ccaattgtagATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTG
EST: TGAAAGGACTCCTGATCCCAGGGCCAATATTCATGAGCTTTTTCTTTGCC ATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTGEST: gi|93012844|gb|EB638364.1|EB638364
genomic: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCCgtgagttttt ... ccaattgtagATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTG
EST: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCC ATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTGEST: gi|50332340|gb|CO527466.1|CO527466
genomic: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCCgtgagttttt ... ccaattgtagATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTG
EST: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCC ATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTGEST: gi|101391714|gb|EB817793.1|EB817793
genomic: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCCgtgagttttt ... ccaattgtagATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTG
EST: TGAAAGGACTCCTGATCCAAGGGGCAATATTCATGAGCTTTTTCTTTGCC ATATCAAACATGGGTGAGAAAGTACCTTCATTCAAAGGEST: gi|71767963|gb|DR965900.1|DR965900
genomic: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCCgtgagttttt ... ccaattgtagATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGG
EST: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCC ATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTG
genomic: TGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCCgtgagttttt ... ccaattgtagATATCAAACATGGTTGAGAAAGTACCTTCATTCAAAGGAGGTGGAACATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACATGGTGTTAGTCCACTTACTCCAATGAAAGGACTCCTGATCCAAGGGCCAATATTCATGAGCTTTTTCTTTGCCgtgagtttttttttactcactcaagtctttctttgaccttgctttttttagttgtacttcactgcactaccaattgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT