1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...tggaagactgaaacgcacaagggttcctcactagtaaatcttccattgttcttgttcggattggtaatgcgtaacatcatgtaaaaacattctttgacagGTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTGGCTCCGAGTGTAGCTTGGGCCCATGGCCGACCGTATGAAAAATCTGCCA
species | Zea mays |
transcript | GRMZM2G063258_T05 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: ATGAGTTAACTCCAACTAAGGCGGTTTTGGAGTTAATGAATCTTCCCCAG GTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTGEST: gi|94479866|gb|EB708824.1|EB708824
genomic: ATGAGTTAACTCCAACTAAGGCGGTTTTGGAGTTAATGAATCTTCCCCAGgtacgttatt ... tctttgacagGTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTG
EST: ATGAGTTAACTCCAACTAAGGCGGTTTTGGAGTTAATGAATCTTCCCCAG GTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTGEST: gi|71770744|gb|DR968681.1|DR968681
genomic: ATGAGTTAACTCCAACTAAGGCGGTTTTGGAGTTAATGAATCTTCCCCAGgtacgttatt ... tctttgacagGTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTG
EST: ATGAGTTAACTCCAACTAAGGCGGTTTTGGAGTTAATGAATCTTCCCCAG GTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTGEST: gi|87155122|gb|DY399911.1|DY399911
genomic: ATGAGTTAACTCCAACTAAGGCGGTTTTGGAGTTAATGAATCTTCCCCAGgtacgttatt ... tctttgacagGTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTG
EST: ATGAGTTAACTCCAACTAAGGCGGTTTTGGAGTTAATGAATCTTCCCCAG GTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTG
genomic: ATGAGTTAACTCCAACTAAGGCGGTTTTGGAGTTAATGAATCTTCCCCAGgtacgttatt ... tctttgacagGTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTG
ttgttcttgttcggattggtaatgcgtaacatcatgtaaaaacattctttgacagGTTGAGGAAGTCTGACGAGGCTAGCAACGGAGTTCTGCATTTTTCCACTTGGCTCCGAGTGTAGCTTGGGCCCATGGCCGACCGTATGAAAAATCTGCCA
gcgtaac putative branch site (score: 3)
cattcttt putative PPT
taaaaacattcttt TA-rich tract