Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cgtcactttaagaacatgcatgatccggttagaacagcaagatatgataaatcgatttgaatccaaatctgaccctctggttcggcttggttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTACCTGCACGTGGTCTGGAACATCGGCGGTACGCTGACAATGCTCGGTTGCG

Basic information

species Zea mays
transcript GRMZM2G029087_T03
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G029087_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os02g03280.3 (Oryza sativa), 3'ss of exon 1
-----cgtcactttaagaacatgcatgatccggttag-aacagcaagatatgataaatcgatttgaatccaaatctgaccctctggttcgg--cttggt--tgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTACCTGCACGTGGTCTGGAACATCGGCGGTACGCTGACAATGCTCGGTTGCG
         ||    |||   || ||  |  | ||    | |   |    |  | |   |||| |  |  |    ||      ||  | |   | ||    ||||||||||| ||||| || || ||||  || |||||  |||||||||||||||| ||||||||||| | || |||||||||||| | | |||| |||||||| ||||
gttgtaaatacaactagattttgtattttttgcttcttgatattcatgcgtccttatcagattgggtttaatggttgcaataatgacttgaatcctgacggtgcctgcagGTTTACCTGACACTATGCGTCGCCCTGGCTGCGTCGGCGGTGGGCGCATACCTGCACGTCGCCTTGAACATCGGCGGGATGTTGACTATGCTCGGGTGCG

upper sequence: GRMZM2G029087_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os02g03280.2 (Oryza sativa), 3'ss of exon 1
cgtcactttaagaacatgcatgatccggttag-aacagcaagatatgataaatcgatttgaatccaaatctgaccctctggttcgg--cttg--gttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTACCTGCACGTGGTCTGGAACATCGGCGGTACGCTGACAATGCTCGGTTGCG
     |    |||   || ||  |  | ||    | |   |    |  | |   |||| |  |  |    ||      ||  | |   | ||  | ||||||||||| ||||| || || ||||  || |||||  |||||||||||||||| ||||||||||| | || |||||||||||| | | |||| |||||||| ||||
-----caactagattttgtattttttgcttcttgatattcatgcgtccttatcagattgggtttaatggttgcaataatgacttgaatcctgacggtgcctgcagGTTTACCTGACACTATGCGTCGCCCTGGCTGCGTCGGCGGTGGGCGCATACCTGCACGTCGCCTTGAACATCGGCGGGATGTTGACTATGCTCGGGTGCG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|76282960|gb|DV022528.1|DV022528
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|148964263|gb|EE015455.2|EE015455
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211089859|gb|FL268126.1|FL268126
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211097262|gb|FL268158.1|FL268158
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|76288416|gb|DV027984.1|DV027984
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|149108188|gb|EE292533.2|EE292533
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|148965311|gb|EE016118.2|EE016118
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|148997294|gb|EE035788.2|EE035788
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094789|gb|FL268144.1|FL268144
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211089857|gb|FL268124.1|FL268124
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094787|gb|FL268142.1|FL268142
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211089856|gb|FL268123.1|FL268123
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|8367634|gb|BE050579.1|BE050579
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092318|gb|FL268133.1|FL268133
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|149103195|gb|EE288568.2|EE288568
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211089853|gb|FL268120.1|FL268120
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211089855|gb|FL268122.1|FL268122
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211097264|gb|FL268160.1|FL268160
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094793|gb|FL268148.1|FL268148
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092323|gb|FL268138.1|FL268138
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211097265|gb|FL268161.1|FL268161
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092321|gb|FL268136.1|FL268136
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092315|gb|FL268130.1|FL268130
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211097261|gb|FL268157.1|FL268157
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGNCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211097267|gb|FL268163.1|FL268163
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092317|gb|FL268132.1|FL268132
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|74244275|gb|DT652189.1|DT652189
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|148977344|gb|EE026031.2|EE026031
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092325|gb|FL268140.1|FL268140
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|91877668|gb|EB407625.1|EB407625
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|149008169|gb|EE040357.2|EE040357
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|76013720|gb|DT940890.1|DT940890
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|19351217|gb|BM895749.1|BM895749
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACGTTACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211089852|gb|FL268119.1|FL268119
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094791|gb|FL268146.1|FL268146
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092312|gb|FL268127.1|FL268127
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211089854|gb|FL268121.1|FL268121
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|149048849|gb|EE048352.2|EE048352
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|101392580|gb|EB818220.1|EB818220
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|148954443|gb|EC899866.2|EC899866
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|19351129|gb|BM895661.1|BM895661
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACGTTACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094799|gb|FL268154.1|FL268154
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094794|gb|FL268149.1|FL268149
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211097263|gb|FL268159.1|FL268159
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092320|gb|FL268135.1|FL268135
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211089858|gb|FL268125.1|FL268125
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTNGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|74232623|gb|DT640537.1|DT640537
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|22491303|gb|BU051226.1|BU051226
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACGTTACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|8367633|gb|BE050578.1|BE050578
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|19436220|gb|BM952630.1|BM952630
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACGTTACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094792|gb|FL268147.1|FL268147
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094795|gb|FL268150.1|FL268150
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|149110918|gb|EE294416.2|EE294416
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|87152697|gb|DY397486.1|DY397486
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACGTTACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|37417079|gb|CF646193.1|CF646193
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094796|gb|FL268151.1|FL268151
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094801|gb|FL268156.1|FL268156
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092319|gb|FL268134.1|FL268134
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092313|gb|FL268128.1|FL268128
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|78110665|gb|DV529068.1|DV529068
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094800|gb|FL268155.1|FL268155
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|149031748|gb|EE286370.2|EE286370
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|149086321|gb|EE175862.2|EE175862
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211094798|gb|FL268153.1|FL268153
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|67041238|gb|CO467493.1|CO467493
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|71432249|gb|DR813299.1|DR813299
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092322|gb|FL268137.1|FL268137
EST:     TCAAGAACTTCCGCCAGATCACCCCTGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|50328017|gb|CO523143.1|CO523143
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|50323900|gb|CO519026.1|CO519026
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|37418677|gb|CF647010.1|CF647010
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|149046683|gb|EE048073.2|EE048073
EST:     TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
EST: gi|211092324|gb|FL268139.1|FL268139
EST:     TCAAGAACTTCCGCCAGATCACCCCTGC-GTCCAGACCCACCTCAAGCTC                         GTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC
genomic: TCAAGAACTTCCGCCAGATCACCCCCGCCGTCCAGACCCACCTCAAGCTCgtacgtcccc ... ttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gataaatcgatttgaatccaaatctgaccctctggttcggcttggttgcctgcagGTCTACCTCACCCTGTGCGCGGCGCTGGCCTCGTCGGCGGTGGGCGCTTACCTGCACGTGGTCTGGAACATCGGCGGTACGCTGACAATGCTCGGTTGCG
                     atctgac  putative branch site (score: 3)
         atttgaat  TA-rich tract