1 5' 3' | 2 5' 3' | 3 5' 3' |
gtcacttacccttctttttcttcagttttttggcatatctttcattgattttctgctaatattggtatgcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGACGCACCGCCACCTCCACCGCCACCGCCATCCCGACCTGGGCCTGGGTA
species | Vitis vinifera |
transcript | Vv01s0146g00420.t01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110400784|gb|EC967362.1|EC967362
genomic: GCAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: GCAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110398928|gb|EC965409.1|EC965409
genomic: GCAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: ATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110364707|gb|EC928157.1|EC928157
genomic: ATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: CAGAAGATGAGTTACCAGCATATTCATCCCTCTCCTCTAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110400176|gb|EC966724.1|EC966724
genomic: CAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: CATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110396702|gb|EC962396.1|EC962396
genomic: CATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: ATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110394967|gb|EC960419.1|EC960419
genomic: ATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: AGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110396575|gb|EC962266.1|EC962266
genomic: AGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: GATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110398892|gb|EC965371.1|EC965371
genomic: GATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: GCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110401891|gb|EC968516.1|EC968516
genomic: GCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: GATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110402604|gb|EC960546.1|EC960546
genomic: GATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: GGCCAGGCAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110400272|gb|EC966827.1|EC966827
genomic: GGCCAGGCAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: AGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|352785685|gb|FQ475688.1|FQ475688
genomic: AGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: GGCCAGACAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110402498|gb|EC960273.1|EC960273
genomic: GGCCAGGCAGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: CATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110399908|gb|EC966439.1|EC966439
genomic: CATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: CAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110397216|gb|EC962944.1|EC962944
genomic: CAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: GATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGEST: gi|110398277|gb|EC964522.1|EC964522
genomic: GATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
EST: AGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAG GGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
genomic: AGAAGATGAGTTACCAGCATATTCATCATTCTCCTCAAGgtcacttacc ... gcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATG
agttttttggcatatctttcattgattttctgctaatattggtatgcattttcagGGTTTGGAGGACCTTTTCCATCAGCAGTGCCACCACCGGGGTTTCCTTATGACGCACCGCCACCTCCACCGCCACCGCCATCCCGACCTGGGCCTGGGTA
tgctaat putative branch site (score: 2)
cattttc putative PPT
attgatttt TA-rich tract