1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagtatctcattccccaactacataatacaatttccacgtttagctttagaatcttgagtggtatttacatatgttctgaatttggttttgaatctagcaactgatcagtgtgtaacctgctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCTGGGGACGGCTCTCCTGCTGGAGGAGGTACATGACACAGAGGAAAGGTT
species | Physcomitrella patens |
transcript | PP1S77_67V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GCCAAATGATCCTAACAGCGTTA-TTTTAGTGAGCCCATGNTTTACGTTA ACCCCAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162198661|gb|FC373455.1|FC373455
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|208367002|gb|DC947764.1|DC947764
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162228234|gb|FC404950.1|FC404950
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|37835668|gb|BJ593680.1|BJ593680
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCNTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162245635|gb|FC423318.1|FC423318
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162154039|gb|FC330274.1|FC330274
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|67694439|gb|BJ954672.1|BJ954672
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162188510|gb|FC365108.1|FC365108
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162209828|gb|FC385970.1|FC385970
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162179592|gb|FC355234.1|FC355234
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|37839903|gb|BJ597911.1|BJ597911
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCNTANCAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATNTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|18338874|gb|BJ170900.1|BJ170900
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162170834|gb|FC347448.1|FC347448
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162192158|gb|FC368307.1|FC368307
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162154038|gb|FC330273.1|FC330273
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTNTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|37833923|gb|BJ591935.1|BJ591935
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCNTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162211310|gb|FC387540.1|FC387540
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: AGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|208395989|gb|DC915749.1|DC915749
genomic: AGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|18335371|gb|BJ167390.1|BJ167390
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162175972|gb|FC352378.1|FC352378
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162172926|gb|FC348931.1|FC348931
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|100397597|gb|BY990306.1|BY990306
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAAGA-TCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGEST: gi|208379631|gb|DC927128.1|DC927128
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGA-GAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATG
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162279647|gb|FC455893.1|FC455893
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|208387218|gb|DC945517.1|DC945517
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162209829|gb|FC385971.1|FC385971
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162222137|gb|FC397365.1|FC397365
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGEST: gi|162202407|gb|FC379194.1|FC379194
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCG
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162179591|gb|FC355233.1|FC355233
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTNTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162222136|gb|FC397364.1|FC397364
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162210249|gb|FC386734.1|FC386734
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: TTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162196272|gb|FC374354.1|FC374354
genomic: TTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162198662|gb|FC373456.1|FC373456
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAAGAATGCEST: gi|162279646|gb|FC455892.1|FC455892
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|208382425|gb|DC927959.1|DC927959
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|37833729|gb|BJ591741.1|BJ591741
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCNTANCAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAANCCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162228235|gb|FC404951.1|FC404951
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCEST: gi|208385455|gb|DC956653.1|DC956653
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162149977|gb|FC326508.1|FC326508
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162152925|gb|FC329227.1|FC329227
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162170833|gb|FC347447.1|FC347447
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: TAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162198704|gb|FC374824.1|FC374824
genomic: TAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTT- ACCCAAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGEST: gi|15729088|gb|BI741131.1|BI741131
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCC-AAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATG
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCTTATAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162188509|gb|FC365107.1|FC365107
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: AGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162149978|gb|FC326509.1|FC326509
genomic: AGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162219803|gb|FC396215.1|FC396215
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162160009|gb|FC335671.1|FC335671
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162175971|gb|FC352377.1|FC352377
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|208384149|gb|DC919663.1|DC919663
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTACTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|37827216|gb|BJ585228.1|BJ585228
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCNTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|67692666|gb|BJ952899.1|BJ952899
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|208375875|gb|DC926967.1|DC926967
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|208378525|gb|DC927222.1|DC927222
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|208360484|gb|DC950058.1|DC950058
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|162245636|gb|FC423319.1|FC423319
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|37825532|gb|BJ583598.1|BJ583598
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCNTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA NCCCAAACCAGAGAATTTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCEST: gi|100381203|gb|BY950023.1|BY950023
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGC
EST: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTA ACCCAAACCAGAGA-TCTCAGTTCCTGTGGGCTA
genomic: GCCAAATGATCCTAACAGCGTTATTTTTAGTGAGCCCATGTTTTACGTTAgtaagtatct ... ctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTA
tctgaatttggttttgaatctagcaactgatcagtgtgtaacctgctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCTGGGGACGGCTCTCCTGCTGGAGGAGGTACATGACACAGAGGAAAGGTT
tgctgat putative branch site (score: 3)
ttttgaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagtatctcattccccaactacataatacaatttccacgtttagctttagaatcttgagtggtatttacatatgttctgaatttggttttgaatctagcaactgatcagtgtgtaacctgctgataacagACCCAAACCAGAGAATCTCAGTTCCTGTGGGCTACGACAGCGAAGGAATGCTGGGGACGGCTCTCCTGCTGGAGGAGGTACATGACACAGAGGAAAGGTT
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