1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagaacgcttcctttcgaaggagttcttcacttcatgatttttggtggttcaactagttgctatgcattttaataaataaatatctcagGTACAAGGCGTGGGGAACTTTGTTAGCGCAACAACTTGTGGATTGTGATATCATTGTTGCCTGCATTGATTACAG
species | Physcomitrella patens |
transcript | PP1S62_226V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AAATTAAAGCCGGTATTTATATTCATAACTGGCGGAGCTTGGGTTATTGG GTACAAGGCGTGGGGAACTTTGTTAGCGCAACAACTTGTGGATTGTGATATEST: gi|162156868|gb|FC333022.1|FC333022
genomic: AAATTAAAGCCGGTATTTATATTCATAACTGGCGGAGCTTGGGTTATTGGgtaagaacgc ... aatatctcagGTACAAGGCGTGGGGAACTTTGTTAGCGCAACAACTTGTGGATTGTGATAT
EST: AAATTAAAGCCGGTATTTATATTCATAACTGGCGGAGCTTGGGTTATTGG GTACAAGGCGTGGGGAACTTTGTTAGCGCAACAACTTGTGGATTGTGATAT
genomic: AAATTAAAGCCGGTATTTATATTCATAACTGGCGGAGCTTGGGTTATTGGgtaagaacgc ... aatatctcagGTACAAGGCGTGGGGAACTTTGTTAGCGCAACAACTTGTGGATTGTGATAT
atgatttttggtggttcaactagttgctatgcattttaataaataaatatctcagGTACAAGGCGTGGGGAACTTTGTTAGCGCAACAACTTGTGGATTGTGATATCATTGTTGCCTGCATTGATTACAG
ttttaat putative branch site (score: 1)
ttgctatgcattttaa TA-rich tract