1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaaatggtcctaaccagttcaaatttaaggatgcaattgacgatggggaccgctgcagtgaatgtactctgtgcttcttgttatttcttgctcatttaggaaatagagtgacttgagcaaatctttttacttcttctaacattttgtgaaaatttgtgaatgagcagGGAAATGCAGATGAGATATTTGGAGGGGTGACCATACTATCTGGTATTGTGGGGACTATTTGTGGCGGTCTTTTCTTGGACTATATAGGAGCCTCTCTTC
species | Physcomitrella patens |
transcript | PP1S61_45V6.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GTGCATATGCATATTGGGGTCCCAAAGCAGGTCTAGCAATATTCCAAATG GGAAATGCAGATGAGATATTTGGAGGGGTGACCATACTATCTGGTATTGTGEST: gi|162266670|gb|FC442017.1|FC442017
genomic: GTGCATATGCATATTGGGGTCCCAAAGCAGGTCTAGCAATATTCCAAATGgtaaatggtc ... gaatgagcagGGAAATGCAGATGAGATATTTGGAGGGGTGACCATACTATCTGGTATTGTG
EST: CAAAGCAGGTCTAGCAATATTCCAAATG GGAAATGCAGATGAGATATTTGGAGGGGTGACCATACTATCTGGTATTGTG
genomic: CAAAGCAGGTCTAGCAATATTCCAAATGgtaaatggtc ... gaatgagcagGGAAATGCAGATGAGATATTTGGAGGGGTGACCATACTATCTGGTATTGTG
ttgagcaaatctttttacttcttctaacattttgtgaaaatttgtgaatgagcagGGAAATGCAGATGAGATATTTGGAGGGGTGACCATACTATCTGGTATTGTGGGGACTATTTGTGGCGGTCTTTTCTTGGACTATATAGGAGCCTCTCTTC
ttctaac putative branch site (score: 4)
attttgtgaaaattt TA-rich tract